Hyphomicrobium denitrificans ATCC 51888: Hden_1250
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Entry
Hden_1250 CDS
T01265
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Hden_1250
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hdn01007
]
Hden_1250
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdn03016
]
Hden_1250
Enzymes [BR:
hdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Hden_1250
Amino acid related enzymes [BR:
hdn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Hden_1250
Transfer RNA biogenesis [BR:
hdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Hden_1250
Prokaryotic type
Hden_1250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
Prefoldin_2
tRNA-synt_1e
ABC_tran_CTD
tRNA-synt_1f
IMD
Motif
Other DBs
NCBI-ProteinID:
ADJ23062
UniProt:
D8JWE9
LinkDB
All DBs
Position
1273258..1276077
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AA seq
939 aa
AA seq
DB search
MLEKTFRPAEIEPRINSEWDKSEAFKAGRAVTGGKNASYSIVIPPPNVTGSLHMGHALNN
TLQDILVRFERMRGRDVLWQPGTDHAGIATQMVVERQLAAGKQPSRRELGREEFLKRVWA
WKEESGGTIINQLKRLGASCDWSRERFTMDEGLSKAVVKVFVQLYNEGLIYKDKRLVNWD
PKFQTAISDLEVVQVEARGKFSWSKDGGEPFDAAALGKVLAKDPSGHMYHFRYPLAAKVA
GYDKDYIVVATTRPETMLGDTGVAVHPDDERYAALIKAGAKVKLPLVGREIPIVADEYSD
PEKGTGAVKITPAHDFNDFEVGKRHNLAQINVLDAYGKLVDDVPEAYRGLDRFEARLRVV
ADIDALGLLEKIEPTTHTVPHGDRSNVVVEPWLTDQWYVNAAELAKPAMAAVENGKTVFV
PKNWEKTYFEWMRNIQPWCISRQLWWGHQIPAWYGPDGKYFVAATEDEAQALAQAYYAKS
PTPNPSPQGGGETSGSHVVLKRDEDVLDTWFSSALWPFSTLGWPDETPELGRYYPTSVLV
TGFDIIFFWVARMMMMGLHFMDEVPFKDVYIHALVRDERGQKMSKSKGNVMDPLVLIDEF
GADALRFTLAAMAAQGRDIKLAKSRVEGYRNFATKLWNASRFAEMNECVRQRNFDPKSAT
QIFNKWIIGEAELTAKAVTEALEGYKFNEAAAAIYEFVWGEFCDWYLELIKPLLAGDDED
AKSETRAVTAWTLDQILKMLHPFMPFITEELWAHMVEHGVKRDDLLVLSEWPNLDGLVER
DAVDEVNWVVSLISEVRSVRTEMSVPAGAKVPLVIVGASDAMRERVHRNDETLKRLARLD
GIDFADIAPKGAALIVAGETTAALPLAGIIDMAAEKRRLAKEIDKADSDLKKMDAKLSNP
QFMERAKEEAIEEAKERKAELEAEIKRFSAALKRLEDVG
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaaaaacgttccgcccggccgaaatcgagccgcgcatcaattccgaatgggac
aagtccgaagcgttcaaggccggtcgcgccgttacaggcggaaagaacgcgtcctactcc
atcgtcatcccgccgccgaatgtcaccggctcgctccatatggggcacgcgctcaacaat
acgctgcaggacatcctcgtgcgtttcgagcgcatgcggggccgcgatgttctctggcag
cccggcaccgaccatgccggcatcgcgacgcagatggtcgtcgagcgccagcttgccgcc
ggtaagcagccgtcgcggcgcgagcttgggcgcgaggaattcctgaagcgcgtctgggcg
tggaaagaggaatccggcggcaccatcatcaatcagctgaaacgcctcggcgcgtcgtgc
gactggtcgcgcgaacgcttcacgatggacgaggggctgtcgaaggcggtcgtgaaggtc
ttcgtgcagctctacaacgaggggctgatctacaaggataagcgtctcgtcaattgggac
ccgaagtttcagaccgcgatctcggatctggaagtcgtgcaggtcgaggcgcgcggaaaa
ttctcgtggtcgaaggacggcggcgagccgttcgatgcggcggcgctcggcaaagtgctc
gcgaaagatccgagcgggcacatgtaccatttccgctatccgctcgcagcgaaggtggct
ggctacgacaaggattacatcgtcgtcgcgacgacacggcccgagacgatgctcggcgat
acgggcgttgcggtgcatcccgacgacgagcgttacgcggcgctgatcaaggctggcgcg
aaagtgaagctgccgcttgtcgggcgtgaaattccgatcgttgcggatgaatactccgat
cccgagaagggaacgggtgcggtgaagatcacgcccgcgcacgacttcaacgatttcgag
gtcggcaagcggcacaatctcgcgcagatcaacgtgctcgatgcgtacggcaagctggtc
gacgacgtgccagaggcctatcgcgggctcgatcgcttcgaggcgcggctgcgtgtcgtc
gccgatatcgatgcgctgggcctgctcgaaaagatcgagccgacgacgcatacggtcccg
cacggcgatcgatcgaatgtcgtcgtcgagccgtggctgacggatcagtggtacgtcaac
gccgccgagcttgcgaagcccgcgatggcggcggtcgagaacggcaagacggttttcgtt
ccgaagaattgggagaagacctacttcgagtggatgcggaacatccagccttggtgcatc
tcgcgtcagctgtggtgggggcaccagattccggcgtggtacgggccggacggcaagtac
ttcgttgcggcgacggaagacgaagctcaggcgctggcgcaggcgtattacgccaagtcc
cccacccctaacccctccccgcaagggggaggggaaacgtcgggtagtcacgtcgtgctc
aagcgcgacgaggatgtgctcgacacgtggttctcatcggctttgtggccgttctcgacg
ctcggctggccggacgagacgccggagcttggccgctactatccgacgagcgtgctcgtt
accggcttcgacatcatcttcttctgggtcgcccgcatgatgatgatgggcctgcacttc
atggacgaagtgccgttcaaggacgtctacatccatgccctcgttcgcgacgagaggggg
cagaagatgtcgaagtcgaagggcaacgtcatggacccgctcgtcctgattgacgagttc
ggagccgacgcgctgcgcttcacgctcgcggcgatggcggcgcaggggcgcgatatcaag
ctcgcgaagtcacgcgtcgaaggctatcgcaatttcgcgaccaagctctggaacgcctcg
cgcttcgcggagatgaacgagtgcgtgcggcagcgcaatttcgatccgaagtcggcgacg
cagatatttaacaaatggatcatcggcgaggccgaactgaccgcgaaggccgttaccgaa
gcgctcgaaggctataaattcaacgaagcggccgctgcgatctatgaattcgtctggggc
gagttctgcgattggtatctcgaactgatcaagccgttgctcgcgggcgatgacgaggac
gcgaaatccgagacgcgcgccgtcacggcgtggacgctcgatcaaatcctcaagatgctg
cacccgttcatgccgttcatcacggaagagctttgggcgcacatggtcgagcacggcgtc
aagcgcgacgatcttctggtgctcagcgagtggccgaacctcgacggccttgtcgagcgc
gacgctgtcgatgaggtgaactgggtcgtgtcgctgatttcggaagtgcgctcggtgcgt
accgaaatgagcgttccggcgggcgcgaaggtgccgctcgtcatcgtcggtgccagcgac
gccatgcgcgagcgcgtccatcggaatgacgaaacgctgaagcggctggcgcgtctcgac
ggtatcgacttcgccgatatcgcgcccaaaggcgcggcgctgatcgttgcgggcgagacg
acggcggcgttgccgctcgcaggcattatcgacatggctgccgagaagcggcgtcttgcg
aaagagatcgacaaggcggacagcgacctcaagaagatggatgcgaaactttccaacccg
cagttcatggagcgggcgaaggaagaagccattgaggaagcgaaagaacgcaaggccgaa
ctcgaagccgagatcaagcggttctcggctgcgctaaaacggctggaggatgtcggctga
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