Hyphomicrobium denitrificans ATCC 51888: Hden_1722
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Entry
Hden_1722 CDS
T01265
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdn03400
]
Hden_1722
DNA repair and recombination proteins [BR:
hdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Hden_1722
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_16
RecA_N
Lon_C
DUF7125
nSTAND_NTPase5
AAA_30
AAA
AAA_22
NTPase_1
nSTAND3
SLFN-g3_helicase
NACHT
ABC_tran
AAA_24
MeaB
NPHP3_N
zf-RING_10
Rad51
AAA_14
DAP3
AAA_19
HepII_C
ATPase_2
AAA_5
Zeta_toxin
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ADJ23529
UniProt:
D8JYS7
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All DBs
Position
1755352..1756728
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AA seq
458 aa
AA seq
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MAKAAKSLYVCQACGATATRWAGKCSACGDWNTLVEETDAGPPPGSGITRQSKGRVIKLE
TLIGSAEEAPRFSTGIMELDRVTGGGVVPGSAILIGGEPGIGKSTLLLQVAAHLARRGGR
SIYFSGEEAIAQVRLRAGRLGLADAQVGLASETNLSNILATLSDDRPPDLVIIDSIQTLW
ADTLDAAPGTVSQVRAAALALIRYAKMAGAALLLVGHVTKDGQIAGPKVIEHMVDTVLYF
EGDRGLPYRILRAVKNRFGPSDEIGVFEMVTGGLKEVANPSELFLGDRDSQSPGAAVFAG
IEGTRPLLVEIQALVAPSGLGTPRRAVVGWDNNRLAMLLAVLDARCGVSFTGHDVYLNVA
GGLKIAEPAADLAAAAALLSAMTGVPLPHDAVFFGEVSLSGAVRAAAMMTPRLKEASKLG
FSQAFLPESGEVDTAGLKVSLSRIAHLKSLAAAAAPCN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggccgcgaaatcgctttacgtctgtcaggcctgcggggccaccgcgacgcgc
tgggcggggaaatgttccgcctgcggagactggaacacgctcgtcgaagagaccgacgcg
ggcccgcctcccggctccggcatcacgcggcaatcgaaaggccgcgttatcaagcttgag
acgctcatcggatcggccgaggaagcgccgcgcttttcgaccggcatcatggaactcgac
cgcgtgaccggcggcggcgtcgtgcccggctccgccattctgatcggcggcgagcccggc
atcgggaaatcgacattactgttgcaggtcgcggcgcatctcgcgcggcgcggcgggcgt
tcgatttatttttcgggcgaggaagccatcgcgcaggtccggctgcgcgccggaaggctg
gggctcgcggatgcgcaagtcggcctcgcgtcggagaccaatctctcgaacattctcgcg
acgctcagcgacgaccgcccgccggacctcgtcatcatcgattccatccagacgctttgg
gccgacacgctcgacgcggctcccggcaccgtcagccaggttcgcgcggcggcgctggct
ctgatccgctacgccaagatggcgggagccgccctgctcctcgtcgggcacgtcaccaag
gatggtcagatcgccgggcccaaggtcatcgagcacatggtcgataccgtgttgtacttc
gaaggcgaccgggggctcccctatcgcatcctgcgagcggtcaagaaccgcttcgggccg
agcgacgaaatcggcgtattcgagatggtgaccggcgggctgaaggaagtcgccaacccg
tccgagttgttcctgggagaccgcgacagccaaagcccgggcgcggccgtcttcgccggg
atcgaaggtacgcgccccctactcgtcgaaatccaggcgctggtggcgccgtcgggcctc
gggacgccccgccgtgccgtcgtcggctgggacaacaatcggctggccatgctgctcgcg
gtgctcgacgcccgctgcggagtttcgtttaccggtcacgacgtctacctgaacgttgca
ggtggtctcaaaatagcggagcccgctgccgatctcgcagccgcggcggctctgctgtcg
gccatgaccggcgtgcctctgcctcacgacgccgtgtttttcggggaggtgtcgctttcg
ggtgccgtccgcgccgccgccatgatgacgccgcgcctgaaagaagcctccaagctcggg
ttttcacaagcttttctgcccgagagcggcgaagtcgataccgcgggactgaaagtctcg
ctgtcccgtatcgcacatctcaagtcacttgcagcggcggcggcgccatgcaactga
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