Hyphomicrobium denitrificans ATCC 51888: Hden_1924
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Entry
Hden_1924 CDS
T01265
Name
(GenBank) prolyl-tRNA synthetase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Hden_1924
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hdn01007
]
Hden_1924
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdn03016
]
Hden_1924
Enzymes [BR:
hdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
Hden_1924
Amino acid related enzymes [BR:
hdn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Hden_1924
Transfer RNA biogenesis [BR:
hdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Hden_1924
Prokaryotic type
Hden_1924
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
ProRS-C_1
Motif
Other DBs
NCBI-ProteinID:
ADJ23725
UniProt:
D8JZC3
LinkDB
All DBs
Position
complement(1964185..1965717)
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AA seq
510 aa
AA seq
DB search
MSKRALSVSREENFPDWYQAIVRDGDMAETSPVRGCMIIKPWGWGVWERLQAELDARIKD
TGHDNCYFPLFIPMSFIAKEAEHVEGFAKEMAVVTHHRLKNEGGKLVVDPDAKLEEPLIV
RPTSETIIGDAFQRWIKSYRDLPLLVNQWANVVRWEMRTRLFLRTAEFLWQEGHTAHADK
DDAVAETLKMLEVYRTFAEDVLAMPVIAGEKPANERFPGADNTYSIEAMMQDGKALQAGT
SHYLGTHFAEAQNIQFQNADGKLTYCHTTSWGVSTRLIGGVIMTHGDDDGLRLPPAIAPR
QIVIVPMLREKPEDAALIEYCAALEKDLKAAGIRTLVDAKAVKSAEKRWNWVRRGAPVIV
EIGGRDASGGNVTFMRRDKLRDGDKVISQTLPRADFVSQAPALLKEIQQALYAEAKARLD
GNIITNLNSFEDLAAYFGPAEGDDEGGAFKGWARVPWSRPEGDSLDAIADRLKALKLTIR
NAPLGQEQAVGKCLFTGEPAKEYVLIARAY
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgtgccctgtccgtcagccgtgaagagaacttccccgactggtatcaggcg
atcgtccgcgacggcgacatggccgagacgagcccggtgcgcggctgcatgatcatcaag
ccgtggggctggggcgtgtgggagcgcctgcaggccgaactcgatgcgcgcatcaaggat
accggccacgacaattgttacttcccgctcttcattccgatgagcttcatcgccaaggaa
gccgagcacgtcgaaggcttcgccaaggaaatggcggtcgtcacgcatcaccggctgaag
aacgagggcggcaagctcgtcgtcgatcccgatgcgaaactcgaagagccgctgatcgtt
cgtccgacatccgagacgatcatcggcgacgcgtttcagcgctggatcaaaagctatcgc
gacctgccgctgctcgtgaaccagtgggcgaacgtagtgcgctgggaaatgcgcacgcgt
cttttcctgcgcacggcggaattcctctggcaggaaggccataccgcgcacgcggacaag
gatgacgccgtcgccgaaacgctgaagatgctcgaagtctatcgcacgttcgctgaggat
gtcctcgcgatgcccgtgatcgcgggcgaaaagccggcgaacgagcgcttccccggcgcc
gacaacacctattcgatcgaagcgatgatgcaggatggcaaggcgctgcaggccggcacc
tcgcattatctcggaacgcatttcgcggaagcgcagaacattcagttccagaacgccgac
ggcaagctcacttattgccatacgacgagctggggtgtttcaacccgtctcatcggcggc
gtgatcatgacccacggcgacgacgatggcctgcgtttgccgcccgcgatcgcgccgcgc
cagatcgtcatcgtgccaatgctgcgcgagaagccggaagacgccgcgctcatcgaatac
tgcgcggcgctcgaaaaagatttgaaggccgccggcattcgcacgctcgtcgatgcgaag
gcggtgaagtccgccgagaagcgctggaactgggtacgccgcggcgcgccggtcatcgtc
gaaatcggcggccgcgacgcgagcggtggcaacgtcacgttcatgcgtcgcgataagctg
cgcgacggcgacaaggtcatctcgcagaccttgccccgcgcagatttcgtcagtcaggct
ccggcgctgctgaaggaaatccaacaggcgctctatgccgaagccaaggcgcggctcgac
ggcaacatcatcacgaacctcaattcgttcgaggatctggccgcctatttcggcccggcg
gagggcgacgatgaaggcggcgccttcaagggctgggcgcgcgttccctggtcgcggccc
gagggcgatagcctggacgcgatcgcggatcgcctgaaagccctgaaattgaccatccgg
aatgccccgctgggccaggaacaggcggtgggcaagtgtcttttcacgggagaacccgcg
aaggagtatgtcttaatcgcccgagcctattaa
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