Hyphomicrobium denitrificans ATCC 51888: Hden_1955
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Entry
Hden_1955 CDS
T01265
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdn03032
]
Hden_1955
03036 Chromosome and associated proteins [BR:
hdn03036
]
Hden_1955
03400 DNA repair and recombination proteins [BR:
hdn03400
]
Hden_1955
DNA replication proteins [BR:
hdn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Hden_1955
Chromosome and associated proteins [BR:
hdn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Hden_1955
DNA repair and recombination proteins [BR:
hdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Hden_1955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ADJ23756
UniProt:
D8JPM2
LinkDB
All DBs
Position
complement(1995725..1995997)
Genome browser
AA seq
90 aa
AA seq
DB search
MSKKDLIDAVARDCELTKEKASGVVDAVLAHIREAMKEGHEVRIPDFGTFKVAARKAREG
RNPATGMTIQIPASRVPKFTPAKGLKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaaagatttgatcgacgctgtcgcgcgtgactgcgaactcaccaaggaaaag
gccagcggcgtcgtcgatgccgtgctcgcgcatatccgcgaagcgatgaaggaaggccac
gaagtccgcattccggatttcggcacgttcaaggttgccgctcgcaaagcccgcgaaggc
cgcaatcccgcaaccggcatgacgatccagatcccagcgtcgcgcgtgccgaagttcacg
cccgcgaagggtttgaaggacgcgctcaactga
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