Hyphomicrobium denitrificans ATCC 51888: Hden_2016
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Entry
Hden_2016 CDS
T01265
Name
(GenBank) cell wall hydrolase/autolysin
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Hden_2016
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hdn01011
]
Hden_2016
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hdn03036
]
Hden_2016
Enzymes [BR:
hdn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
Hden_2016
Peptidoglycan biosynthesis and degradation proteins [BR:
hdn01011
]
Peptidoglycan biosynthesis and degradation
Amidase
Hden_2016
Chromosome and associated proteins [BR:
hdn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Hden_2016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
AMIN
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
ADJ23817
UniProt:
D8JPT3
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All DBs
Position
2059933..2061204
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AA seq
423 aa
AA seq
DB search
MAAALLCAVTGAASAAGSAADAPKTGKSQIAIANPSPDADSRSKVLRTRFVVGLERKVDY
RVFAIANPNRVVIELPDVTMQLPAIDENKPVGLVRAVRAGLAAPGTTRIVIGVTQPVVVE
SSAIEQDDKGLSRLAIVIRPAGSPMGGPGMKGFAEPSALGAAGLQLQPPLPRPAVKPTER
AAKAFKPIIVLDPGHGGYDSGAVKFGTVEKNVVLAFSLVLRDLLEKTGRYKVLMTRNDDT
FIPLDDRTKYAERNRANIFIAIHADYSDQGSRARGATIYTLRDGVAKNLERSAKGNAAEN
VLSAEEIDTVRKVSDDVSAVRGILADLAERDVEMTHERTGMFAKTVIENMGESTPMRNEP
DQQAAFRVLKTAQFPSVLIELAYVTNKQDASNLQSDGWRGKVAQSIVSAIDNYFSHEIAR
LPF
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggccttgctctgtgccgtcaccggcgcggcatccgccgcaggctctgccgcc
gacgcgccgaaaacgggcaagtcccagatcgcgatcgccaatccctctcccgacgccgat
tcccgttcgaaggttcttcgcacgcgatttgtcgtcgggctcgaacgcaaggtcgactat
cgcgttttcgcgatcgccaatccgaaccgcgtcgtcatcgaacttcccgacgtcaccatg
cagctccccgcgatcgacgagaacaagcccgtcggcctggtgagagcggtgcgtgccgga
ctggccgctcctggaacgacgcgcatcgtcattggcgtgacgcagccggtcgtcgtcgaa
agctcggcgatcgagcaggacgacaaggggctgtcgcgccttgccatcgtcattcgtccg
gccggctctccgatgggcggtccgggcatgaaaggtttcgccgagccgtccgccctcggc
gctgcgggtttgcagttgcagccgccgcttccccgtccggccgtgaagccgaccgaacgc
gccgcgaaggcattcaagccgatcatcgtgctcgatcccggccacggcggatacgactcc
ggcgcggtgaagttcgggacggtcgagaagaacgtcgtgctggcgttcagcctcgtgctg
cgcgatctgctcgaaaaaaccggccgctataaagttctgatgacgcgcaacgacgacacg
ttcattccgctcgacgaccgaacgaaatatgccgagcgcaacagggcgaacatcttcatc
gccattcacgccgactattccgaccagggctcgcgcgcacgcggtgccacgatctacacg
ctgcgcgatggcgtcgcgaaaaatctcgaacgctcagccaaaggcaacgccgccgaaaac
gttctctcggcggaggaaatcgatacggtcagaaaggtcagcgacgacgtcagcgcggtc
aggggcatcctggcggatctcgcggagcgcgacgttgaaatgacacacgaacgcaccggc
atgttcgcgaaaacggtgatcgagaacatgggcgagagcacgccgatgcgaaacgagcct
gatcagcaggccgctttccgcgtgctcaagacggcgcaattcccgtctgtcctgatcgag
ctcgcctacgtcaccaacaagcaggatgcgagcaatctgcaatcggatggttggcgcgga
aaggtcgcgcagtcgatcgtctcggcgatcgacaattatttctcgcacgagatcgcgcgc
ctgcctttttag
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