Hyphomicrobium denitrificans ATCC 51888: Hden_2018
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Entry
Hden_2018 CDS
T01265
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdn03021
]
Hden_2018
Transcription machinery [BR:
hdn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Hden_2018
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF3431
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ADJ23819
UniProt:
D8JPT5
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Position
complement(2062944..2063834)
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AA seq
296 aa
AA seq
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MAATKGLPTLAGGSLGLSRYLEEIRKFPMLAPNEEYMLAKRWQQHEDSDAAEKLVTSHLR
LVARIAMGYRGYGLPIGEVISEGNVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILR
SWSLVKMGTTAAQKKLFFNLRRAKSQLQALDDGDLRPEHVKAIATKLGVPEEDVVSMNRR
LGGDASLNAPIRAESESGEWQDWLVDDTPTQEDRLVEDEELRRRKSYLSSALSVLNDRER
RVFEQRRLAEEPATLEELSAEFGVSRERIRQIEVRAFEKVQKAVTSTARRAEAPAA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaacaaaaggtcttccgacgctggctggcgggtcgctcggcctctcgcggtat
ctcgaggagatccgcaagtttccgatgctcgcacccaacgaagaatacatgctcgccaag
cgttggcagcagcatgaagattccgacgcggccgaaaaattggtcacgtcgcatcttcgc
ctcgtcgcgcgcatcgcgatgggctatcgcggctatggcttgccgatcggagaagtgatc
tccgaaggcaacgtcggcttgatgcaggcggtgaaacggttcgacccggaaaagggcttc
cgcctcgccacatatgcgatgtggtggatacgcgcatccattcaagagtacattttgcgc
tcgtggagccttgtgaagatgggcaccacggcggcgcagaagaagctcttcttcaatctt
cggcgcgccaagagccagctgcaggcactggacgacggtgatctgcgaccagagcacgtc
aaggcgatcgcgaccaagctcggcgttccggaagaggatgtggtgagcatgaatcgccgt
ctcggcggtgatgcttcgctcaacgcgccgatccgcgccgaatcggagtccggtgaatgg
caggactggctcgtcgacgatacgccgacgcaggaagaccggctcgtcgaggacgaggaa
ctgcggcggcgcaagtcgtacctctcttcggccttgtcggtgctgaatgaccgtgaacgc
cgcgtttttgaacagcggcgtctggcggaagagccggcgacgcttgaagaactgtcggcc
gagttcggcgtcagccgcgagcgcattcgccagatcgaggtgcgcgccttcgagaaggtt
cagaaggcggtgacctcgacggcgcggcgggcggaagcgccggcggcgtaa
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integrated database retrieval system
