Hyphomicrobium denitrificans ATCC 51888: Hden_2239
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Entry
Hden_2239 CDS
T01265
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Hden_2239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdn03400
]
Hden_2239
DNA repair and recombination proteins [BR:
hdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Hden_2239
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Hden_2239
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ADJ24037
UniProt:
D8JR52
LinkDB
All DBs
Position
complement(2293184..2293903)
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AA seq
239 aa
AA seq
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MQWTDEAIVLSVKPHGETAAVIELWTRTHGRHLGLVHGGRSRRLRPILQPGNHVDATWKA
RLSDQLGHVTIEMRRAFAAETLDDAAALAALSTLTTLTHLLPERDPHPNLYEITLFVLGF
LNDATVWPALLVRWELALLEELGFGLDLSQCAATGSNDQLIYVSPRTGRAVSASAGEPYR
DKLLPLPAFLTKHRSGHVTEDDIRLGFALTGHFLETRVLLPRGQSLPQPRSRLLAHLPQ
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcaatggacggatgaagccatcgttctatcggtcaagccgcacggtgaaacggcggcg
gtcatagaactgtggacgcggacgcacggccgccatctcggcctcgtccacggcggccgg
tcgcggcgcctccgcccgatcctgcaacccggcaaccacgtcgacgcgacgtggaaagcg
cggctctccgatcagctcggtcacgtcacaatcgaaatgcgtcgcgcctttgcggccgaa
accctcgacgatgccgcagccctcgcggcgctctcgacgctgacgacgctgacgcatctg
ctgcccgagcgcgacccgcatccgaacctctacgaaatcaccctgttcgttctcggcttc
ttgaatgatgcaacggtttggccggcgcttctcgttcgctgggagctggcgctgctcgag
gaactgggatttggtctcgatctcagccaatgcgcggcaacggggagcaacgatcagctg
atctatgtctcgccgcgcacgggacgcgccgtgtcggcgtccgccggcgaaccgtaccgg
gacaagctgcttccgctacccgcgtttctgaccaagcatcgttccggtcatgtgacggag
gacgatatccggctcggtttcgcgctgaccggacatttcctggaaacgcgcgttttactt
ccacgcggccaaagcctgccgcagccgcgctcgcgtctgttggcgcacctcccgcagtga
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