Hyphomicrobium denitrificans ATCC 51888: Hden_2323
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Entry
Hden_2323 CDS
T01265
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdn03032
]
Hden_2323
03036 Chromosome and associated proteins [BR:
hdn03036
]
Hden_2323
03400 DNA repair and recombination proteins [BR:
hdn03400
]
Hden_2323
DNA replication proteins [BR:
hdn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Hden_2323
Chromosome and associated proteins [BR:
hdn03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Hden_2323
DNA repair and recombination proteins [BR:
hdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Hden_2323
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ADJ24120
UniProt:
D8JRQ2
LinkDB
All DBs
Position
complement(2377760..2378059)
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AA seq
99 aa
AA seq
DB search
MIKSELVQKIATANPHLYHRDVERIINVIFDEIVDALSRGDRVELRGFGAFTVKHRASRQ
GRNPRTGTTVAVAEKFVPFFKTGKELRDRLNTLNGQHAA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaatcggaactcgtacaaaaaattgcgactgcaaatccgcatctttatcatcgc
gatgtggaacgcatcatcaacgtgatcttcgatgagatcgttgatgcgctgtcgcgagga
gatcgcgtcgaactgcgtgggttcggtgctttcacggtgaagcatcgcgcgtctcgtcag
gggcgcaatccgcgcacgggaacgaccgtggcggtggctgaaaagttcgtgccgtttttc
aaaaccggcaaagagcttcgcgatcgtctgaatacgctcaacggtcaacacgccgcgtaa
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