Hyphomicrobium denitrificans ATCC 51888: Hden_2383
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Entry
Hden_2383 CDS
T01265
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn00730
Thiamine metabolism
hdn01100
Metabolic pathways
hdn01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Hden_2383
Enzymes [BR:
hdn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Hden_2383
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ADJ24180
UniProt:
D8JRW2
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Position
2443969..2445861
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AA seq
630 aa
AA seq
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MNKVTRASEIVTPKVTTGPVQGSRKVYASPDAAPDLRVPFREIVLSEASGEAPFRVYDSS
GPYSDAAATIDVEKGLPRVRDAWVQERGCVEAYDGRAVKPEDNGNVSGSHAARVFPTVFR
PLRAMAHTPQGGAEFASGDHRPLTQFEYARAGIVTKEMIYVAYRENLGRAEALARAKDAI
GDGESFGADIPAHITPEFVRDEIARGRAIIPANINHGELEPMIIGRNFLVKINANIGNSA
VTSSVEEEVEKMVWAIRWGADTVMDLSTGRNIHTTREWIIRNSPVPIGTVPIYQALEKCD
GDPVKLTWELYRDTLIEQCEQGVDYFTIHAGVRLPFVPLTANRVTGIVSRGGSIMAKWCL
AHHKESFLYERFDEICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTKIAW
AKGCQVMIEGPGHVPMHKIKVNMEKQLKACGEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWYGTAMLCYVTPKEHLGLPNRDDVKTGVITYKIAAHAADLAKGHPAAQLRDDALSRAR
FDFRWQDQFNLSLDPDTATAFHDETLPKDAHKVAHFCSMCGPKFCSMKITQDVRDYAATL
NDKEIGMADMSEKFRQMGSALYVEADRSTE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagtcacccgtgcttccgagatcgtaacgccgaaggtgacgacggggccggtt
cagggctcgcgcaaagtctatgcatcgcccgacgctgcgccggatctgcgcgttccgttc
cgcgagatcgtgctcagcgaggcaagcggcgaagcgccgtttcgcgtgtacgattcctcg
gggccttattcggatgcggcggcgacgatcgatgtcgagaaaggcttgccgcgcgtgcgc
gatgcgtgggtgcaagagcgcggttgcgtcgaagcgtatgacgggcgcgcggtgaagccc
gaggacaacggcaatgtttcgggctcgcacgccgcacgcgtgtttccgacggtgttccgg
ccgctgcgggcgatggcccacaccccgcaaggcggagcggagtttgcaagcggtgatcac
cggcctctcacgcaattcgagtatgcgcgggcggggatcgtcacgaaggagatgatttac
gtcgcgtatcgcgagaacctggggcgcgccgaagctctggcgcgggcgaaggatgcgatc
ggcgacggggaaagtttcggcgcggatatcccggcgcatatcacgcctgagttcgttcgc
gatgagatcgcgcgcggccgcgccatcattccggcgaacatcaatcacggcgagctcgag
ccgatgatcatcggccgcaacttcctggtgaagatcaacgccaacatcggcaactcggcc
gtcacgtcgtcggtcgaggaggaagtcgagaagatggtgtgggcgatccgctggggcgcc
gataccgtcatggacctctcgaccggccggaacattcacacgacgcgcgaatggatcatt
cgcaattcacccgtgccgatcgggaccgtgccgatctatcaggcgctcgaaaaatgcgac
ggcgatccggtcaagctgacgtgggagctttatcgcgacacgctgatcgagcagtgcgag
caaggcgtcgactacttcacgatccatgccggcgtgcggctgccgttcgtgccgctgacg
gccaatcgcgtgacgggcatcgtttcgcgcggcggctcgatcatggcgaagtggtgcctc
gcgcatcacaaggaaagcttcctctacgaacgcttcgacgagatttgtgatctgatgcgc
aagtacgacgtgtcgttctcgctcggtgatgggctgcgtcctggctcgatcgcggacgcc
aacgaccgcgcgcaattcgcggaactcgaaacgctcggagagctgaccaagatcgcctgg
gccaaaggctgccaggtgatgatcgaaggccccggccacgtgccgatgcacaagatcaag
gtcaacatggagaagcagctcaaagcctgcggggaagctccgttctatacgctcggacca
ctgacgaccgacatcgcaccgggatacgatcacatcacgtccggcatcggcgcggcgatg
atcggctggtacggcacggcgatgctctgctacgtgacgccgaaggagcacctcggactg
ccgaaccgcgacgacgtcaagacgggcgtcatcacgtacaagatcgcggcgcatgcggcc
gatctcgcaaaggggcatccggcggcgcagctccgcgacgacgcgctctctcgcgcgcgg
ttcgatttccgctggcaggatcagttcaacctgtcgctcgatcccgacacggcgacggca
ttccacgacgagacgctgccgaaggacgcccacaaggtcgcgcatttctgctcgatgtgc
gggccgaagttctgctcgatgaagatcacgcaggacgtgcgcgactacgcggcgacgctc
aacgacaaggaaatcggcatggccgacatgagcgagaagttccgccagatgggcagtgcg
ctctatgtcgaggctgaccggtcgaccgaatag
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