Hyphomicrobium denitrificans ATCC 51888: Hden_2636
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Entry
Hden_2636 CDS
T01265
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
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Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
HTH_7
Mg_chelatase
HTH_50
HTH_23
AAA_16
CENP-B_N
AAA_3
HTH_17
HTH_22
AAA_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ADJ24432
UniProt:
D8JTB4
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Position
2698203..2699711
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AA seq
502 aa
AA seq
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MSKRVLIVDDDPAQRRILEETVKRFGFETKTCGSGEQALQILESQERDPIALVILDLVMP
GVDGMAVLERVGHAQGMPPIIVQTAHGSIETAINAMRRGAVDFVVKPASPERLEVSIKSA
LKIEALAGEINRIKKKVEGTLTFGDLVMRGDAMKRVISLGKRAAASTIPVLIEGESGVGK
ELIARAIQGESERVGRPFITVNCGAIPENLVESILFGHEKGAFTGAVDKRIGKFQEADGG
TLFLDEVGELPLDAQVKLLRALQEGEIDPVGSKKPVKVNFRLISATNRDMIQLVKDGKFR
EDLYYRLNVFPIFVPPLRERIDDVPELARHFAARFAAEEGKRVAAISERAMALLQAYSWP
GNVRQLENTIFRAVVLADGPELTVAEFPQIAAHVDGFEAEIPAAPAAVQKQPAYTGPALI
GAENTVPHTVEIKSTASGSSLGIQAVAEDGEIRSLEAIEADMIRLALGRYRGHMTEVAKR
LNIGRSTLYRKMQEYGLEPRPN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgtgttctgatcgttgatgacgatcccgcccagcgtcgtattctcgaagag
acggtcaagcgtttcggttttgaaaccaagacctgcggctcgggcgagcaggccctccaa
attctcgaatcccaggagcgcgacccgatcgcgctggtgatcctcgatctcgtcatgccc
ggcgtcgacggcatggccgtccttgagcgcgtcggtcatgcgcaggggatgcctccgatc
atcgtgcagaccgctcatggctcaatcgagacggcgatcaatgcgatgcgccgcggcgcc
gtcgatttcgtcgtcaagccggcctcgccggagcggctcgaagtttcgatcaagagcgct
ttgaagattgaagcgctcgcgggtgaaatcaaccgcatcaagaagaaggtcgaaggcacg
ctgacgttcggcgacctcgtcatgcgcggcgacgcgatgaagcgcgtgatttcgctcggc
aagcgtgcggctgcgtcgaccatcccggttctgatcgaaggcgagagcggcgtcggcaag
gaattgatcgcccgcgccatccagggcgagagcgaacgcgttggccgtccgttcatcacc
gtcaactgcggcgcgatccccgagaacctcgtggaaagcattctcttcgggcatgaaaag
ggcgccttcaccggcgccgtcgacaagcgcatcggcaaattccaggaagccgacggcgga
acgctgttcctcgacgaagtcggcgaactgccgctcgacgcgcaggtgaagctgctgcgc
gcgctgcaggaaggcgagatcgatcccgtcggatcgaagaagcccgtgaaggtcaacttc
cggctgatctcggcgacgaaccgcgacatgatccagctggtcaaggacggcaagttccgc
gaagacctctattaccggctgaacgtgttcccgatcttcgtgccgccgctgcgcgagcgc
attgatgacgttccggaacttgcacgtcatttcgcggctcgcttcgctgccgaagaaggt
aagcgcgtcgccgcgatttccgagcgcgccatggcgctactgcaggcctactcgtggccg
ggcaacgtgcgtcagctcgagaatacgattttccgcgccgtcgttcttgccgatgggccg
gagttgacggtcgcggaattcccgcagatcgccgcgcacgtcgatgggttcgaagcggag
attccggcagcaccggccgctgtgcagaagcagcccgcttacacgggaccggcgctcatc
ggcgcggagaacacggtgccgcataccgtcgaaataaaatctacggcatcgggcagctcg
ctcggcattcaggccgtcgcggaagacggagagatccgttcgctcgaagcgatcgaagcc
gacatgatccgcctggcgctcggccgttatcgcggacacatgacggaagtcgccaagagg
ttgaatatcggccgctcgacactttatcgtaaaatgcaggaatacggtctcgaaccgagg
ccgaactga
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