Hyphomicrobium denitrificans ATCC 51888: Hden_2879
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Entry
Hden_2879 CDS
T01265
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hden_2879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdn03400
]
Hden_2879
Enzymes [BR:
hdn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Hden_2879
DNA repair and recombination proteins [BR:
hdn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Hden_2879
Prokaryotic type
Hden_2879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_8
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ADJ24675
UniProt:
D8JUP5
LinkDB
All DBs
Position
complement(2971171..2972283)
Genome browser
AA seq
370 aa
AA seq
DB search
MGAPQKTQKQLPLRPAGPDTVAALLRWYEAERRDLPWRYGPRKKADPYRVWLSEIMLQQT
TVKAVIPYFQKFVARWPNVAALAAAQLEEVLQQWAGLGYYSRARNLKACADAVVRDFDGV
FPRTEVELRELPGIGPYTAAAIAAIAFGEKATPVDGNIERVVSRLFAVQQPLPAAKTEIR
NLAATLTPARRAGDFAQAMMDLGAEICTPKNPSCLVCPVQPDCAASARGIAETLPIKAQK
LARPSRFGIAFLVQREDGAVLLRQRPEAGLLGGMLEVPSTHWGDASPSKREALRSAPVTT
SWMAVPGPVVHVFTHFRLELVVYRAIVPVDASFTLWAEQDRCRWVHRRDLHAQALPSVMK
KVIAHGMNAE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctcctcagaaaactcagaagcagttgcctctccggccggcaggtccggacacc
gtggcggcgttgctccgttggtatgaggccgagcgccgcgatctcccgtggcgctacggt
ccgcgcaagaaagccgatccctatcgcgtctggctgtcggagatcatgctccagcagacg
acggtgaaggccgtcattccgtatttccagaagttcgtcgcgcgctggccgaacgtcgcc
gcgctcgccgccgctcagcttgaggaagtcctgcagcagtgggcaggcctcggctattat
tcccgcgcgcgcaatctcaaagcctgcgccgacgcggtcgtccgcgactttgacggcgta
tttccgcgcaccgaagtcgaactgcgtgagctaccgggcatcggtccctacacggcagcg
gcgattgcggcgattgccttcggcgagaaggcgacgccggtcgatggtaatattgaacgt
gtcgtctcgcgattgtttgcggtccagcagccgcttcctgcggccaagacggaaatccgc
aatctcgccgccacgctgacgccagcccggcgggccggagacttcgcgcaggcgatgatg
gatttgggcgccgaaatctgcacgccgaaaaatccctcctgcctcgtgtgtcccgtacag
cccgattgcgccgcgagcgcgcgcggcattgcggagaccctgccgatcaaagcccagaag
ctggcacgtccgtcgcgcttcggcatcgcgtttctggttcagcgcgaagatggcgccgtg
ctcctccgccagcggcctgaagcgggattgctcggcggcatgctggaagttccatcgacc
cattggggtgatgcgtcaccctcgaagcgcgaagctctgcgctcagcgcccgtgacgaca
tcgtggatggcggtgccgggaccggtcgtgcacgtgttcacgcatttccggctcgaactc
gtcgtctatcgcgcgatcgtgccggtcgatgcgagcttcacgctatgggccgagcaggat
cgctgccgctgggttcatcgtcgcgatctgcacgcgcaggcgctcccgagcgtgatgaaa
aaagtcatcgcgcacgggatgaacgccgagtga
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