Hyphomicrobium denitrificans ATCC 51888: Hden_3015
Help
Entry
Hden_3015 CDS
T01265
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn00270
Cysteine and methionine metabolism
hdn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Hden_3015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hdn03000
]
Hden_3015
03032 DNA replication proteins [BR:
hdn03032
]
Hden_3015
03036 Chromosome and associated proteins [BR:
hdn03036
]
Hden_3015
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
hdn02048
]
Hden_3015
Enzymes [BR:
hdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
Hden_3015
Transcription factors [BR:
hdn03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
Hden_3015
DNA replication proteins [BR:
hdn03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
Hden_3015
Chromosome and associated proteins [BR:
hdn03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Hden_3015
Prokaryotic defense system [BR:
hdn02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
Hden_3015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
ADJ24810
UniProt:
D8JVF6
LinkDB
All DBs
Position
complement(3096034..3097680)
Genome browser
AA seq
548 aa
AA seq
DB search
MKPGLIIDNFAGGGGASLGVEMACWKGPDIAINHDAIALGLHATNHPHTEHHVEDVWAVD
PRAVTKGRPVSLAWFSPDCKHFSKAKGGKPVEKKIRGLAWVVIRWAVAVKPQLIILENVE
EFQDWGPLGPDNLPCPERKGRTFRLFVERLRQAGYEVDWRELKACDYGAPTIRKRLFLIA
RRDGLPIVWPEPTHAKPGSLEVGAGLRKPWRTAAECIDWSLPCPSIFGRGRPLAEKTMAR
IARGVQRYVIDAERPFIINLTHGGRVEDIDEPFKTLTGAHRGEKALVAPFLTKFRANSTG
QSLDDPMCSVTANSFIKRPGGAPPIGLVAPFFVPRHGEHATQEPRCRDVEQPMPTVTATA
NGAGLVAAFMAQHNGGMVGHSLEEPVSTLTAKCSHQQLVSTFLTKMYGSCKDGQDMRQPF
GTVTAQGQHLAEVRAFLMKYYGTGGQHQGCDEPMHTATAKARLGLVTVAGVDYQIVDIGM
RMLSPRELFRAQGFPDSYVIDRLPDGTPISKTDQIRLCGNSVCPPLARAIIAANFGNQVV
REGGRVAA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgggtctgatcatcgataacttcgcgggcggcggcggggcgtcgctcggtgtt
gaaatggcgtgctggaaggggccggatatcgcgatcaatcacgacgcgatcgcgctgggc
ctgcacgccaccaatcatccgcataccgagcaccacgtcgaggacgtctgggccgtcgat
ccgcgcgcggtgacgaagggccggccggtgtcgctggcgtggttttcaccggactgcaag
catttctcgaaggccaaaggcggcaagcccgtcgagaagaaaattcgcggactggcttgg
gtcgtgatccgctgggccgtcgcggtgaagcctcagctcatcatccttgagaatgttgaa
gagttccaggactggggacctctgggtccggacaatctgccatgtccggaaagaaaaggc
cggactttccggcttttcgtcgaacgcttgcgccaggccgggtacgaggtcgactggcgc
gaactcaaggcctgcgactacggcgcgccgacaatccgcaagcgcctgtttctgatcgcg
cgccgggatggactgccgatcgtctggccggagccgacgcacgcgaagccgggttcgctc
gaggtcggggccggactgagaaagccgtggcggacggccgccgaatgcatcgactggtcg
ttgccctgcccctcgatcttcggacgtgggcgtccgctcgccgagaagacgatggcgcgt
atcgcacgcggcgtgcagcggtatgtcatcgatgcggagcggccgttcatcatcaacctg
acgcatggcggccgcgtcgaggacatcgacgaaccgttcaagacgctgaccggcgcgcat
cgcggcgagaaggcgctcgtcgcgccgttccttacgaaattccgcgcgaacagcaccgga
cagtcgctcgatgatccgatgtgctcagtcacggcaaacagcttcatcaagcggccgggc
ggggcgccaccaatcggcttggtggcgccgttcttcgtgccgcgccacggcgagcatgcg
acgcaggagccgcgctgccgcgacgtcgagcagccgatgccgacggtcaccgccacggca
aacggcgccgggctcgtcgccgcgttcatggcgcagcacaacggcggcatggtcggtcat
tcgctcgaagagccagtctcgacgctcaccgcaaaatgcagccatcagcagctcgtctcg
acgtttcttacgaagatgtacggcagctgcaaagacggccaggacatgcgccagccgttc
gggaccgtcacggcgcagggccagcaccttgccgaggtgcgcgccttcctgatgaaatat
tacggcactggcgggcagcatcagggctgcgatgagccgatgcacaccgcaacggcaaag
gcccgtctcggcctcgtgaccgtcgccggcgtcgactaccagatcgtcgacatcggcatg
cggatgctgtcgccgcgcgagttgttccgcgctcagggcttccccgacagctacgtcata
gatcggctgccggacggcacgccgatttcgaagacggaccagatccggctttgcggcaac
tccgtctgcccgccgctcgcgcgcgcaatcattgctgcgaacttcgggaaccaggtcgtg
cgtgaaggcgggagggtcgcagcatga
DBGET
integrated database retrieval system
