Hyphomicrobium denitrificans ATCC 51888: Hden_3253
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Entry
Hden_3253 CDS
T01265
Name
(GenBank) aconitate hydratase 1
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn00020
Citrate cycle (TCA cycle)
hdn00630
Glyoxylate and dicarboxylate metabolism
hdn00640
Propanoate metabolism
hdn00720
Other carbon fixation pathways
hdn01100
Metabolic pathways
hdn01120
Microbial metabolism in diverse environments
hdn01200
Carbon metabolism
hdn01210
2-Oxocarboxylic acid metabolism
hdn01230
Biosynthesis of amino acids
Module
hdn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hdn_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Hden_3253
00630 Glyoxylate and dicarboxylate metabolism
Hden_3253
00640 Propanoate metabolism
Hden_3253
09102 Energy metabolism
00720 Other carbon fixation pathways
Hden_3253
Enzymes [BR:
hdn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
Hden_3253
4.2.1.99 2-methylisocitrate dehydratase
Hden_3253
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
ADJ25046
UniProt:
D8JWT8
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All DBs
Position
3324572..3327286
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AA seq
904 aa
AA seq
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MSALTPTSNDSFNCRKTLTVEGKPYVYYSLPDAEANGLKGISKLPYSMKVLLENLLRHED
GRTVTKADIAAMADWLDNKGKKEKEIGFRPARVLMQDFTGVPAVVDLAAMRDGMTKLGGD
PSKINPLVPVDLIIDHSVIVDEFGTPKALADNVALEYARNGERYNFLKWGQGAFHNFRVV
PPGTGICHQVNLEYLAQTVWTKQLPDGSTVAYPDTLVGTDSHTTMVNGLAVLGWGVGGIE
AEAAMLGQAQSMLIPEVIGFRLTGKLNEGVTATDLVLTVTQMLRKKGVVGKFVEFYGPGL
DSMTLADRATIGNMAPEYGATCGFFPVDSETINYLMISGRDAHRIALVEAYSKAQGLFRE
SGSADPVFSDTLALDLGDVVPSMAGPKRPEGRLALGDIKSGFETALASEYKKPGELEKRV
PVEGKAYDIGHGDVVIAAITSCTNTSNPSVLIAAGLLARNAVARGLTSKPWVKTSLAPGS
QVVAAYLAQSGLQTYLDKIGFNLVGFGCTTCIGNSGPLAPELSKAINDNGIVAAAVLSGN
RNFEGRVSPDVQANYLASPPLVVAHALAGTVLKDLTKDPIGTGSDGKAVYLKDIWPTSQE
IQKFIAENITRDMFKARYADVFKGDTNWQSIAIGGGLTYGWNGESTYVQNPPYFQSIARD
AKPVGDVVNARILGLFGDKITTDHISPAGSIKTSSPAGRYLLDHGVQPVDFNQYGTRRGN
HEVMMRGTFANIRIKNAMVKDANGNVKEGGLTIHYPSGKEMAIYDAAMLYEQENVPLVVF
AGIEYGNGSSRDWAAKGTNLLGVRAVVAQSFERIHRSNLVGMGVAPFTFQDGTSWQTLGL
KGDETVTIRGLAKVKPRETVNLSITRADGTSFDVPVLCRIDTLDEIEYFKNGGILHYVLR
NLAA
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgcactcacacctacatccaacgacagcttcaattgccgcaagaccctcactgtc
gagggcaagccctacgtttactattcgctgcccgatgccgaggccaacggcctcaagggc
atttccaagctcccttattcgatgaaggttctgctcgagaacctgctgcgtcatgaagac
ggacgcacggtgacgaaagccgacatcgcggccatggccgattggctcgataacaagggc
aaaaaggaaaaggagatcggcttccgtccggcgcgggtcctgatgcaggacttcaccggc
gttccggccgtcgtcgatctcgcggcgatgcgcgacggcatgacgaagctcggcggcgat
ccgtccaagatcaatccgctggtgccggtcgatctcatcatcgaccattcggtcatcgtc
gatgaattcggaacgccgaaggcgctcgccgacaacgtggcgctggaatacgcgcgcaac
ggcgaacgctataacttcctgaaatggggccagggcgcgtttcataatttccgcgtcgtg
ccgcccggcaccggcatctgccatcaggtcaatctcgaatacctggcgcaaacggtctgg
acgaagcagttgcccgacggctcgaccgtcgcctatcccgacacgctcgtcggcaccgac
agccatacgacgatggtcaacggccttgccgtgctcggctggggcgtcggcggcatcgaa
gcggaagcggcgatgctcgggcaggcgcagtcgatgctcattccggaagtcatcggcttc
cgcctgactggcaagctcaacgaaggcgtgacggcgacggacctcgtcctgaccgttacg
cagatgctgcgcaaaaagggcgtcgtcggcaaattcgtcgaattctacggtcccggcctc
gacagcatgacgctcgccgaccgggcgacgatcggcaacatggcgccggaatacggtgcg
acgtgcgggttcttcccggtcgactcggagaccatcaattatctcatgatctcgggacgc
gatgcgcatcgcattgcgctcgtcgaagcctactcgaaggcgcagggcctgttccgcgag
tcgggctccgccgatccggtgttcagcgacacgctggcgctcgatctcggcgacgtggtg
ccgtcgatggctggaccgaagcggccggaaggccggctcgcgctcggcgacatcaagagc
gggttcgagaccgcgctggcgtcggaatacaagaagccgggcgagcttgagaagcgcgtt
ccggtcgagggcaaagcctacgacatcgggcatggcgacgtcgtcatcgcggcgatcacg
agctgcacgaacacgtcgaacccgagcgttctgatcgcagccgggcttctcgcccgcaat
gccgtcgcgcgcggattgacgagcaagccgtgggtgaaaacatcgctcgcgcctggatcg
caggtcgtcgccgcttatctcgcgcagtcgggattgcagacctatctcgacaagatcggt
ttcaatctcgtcggcttcggctgcaccacctgcatcgggaactcgggaccgctggcgccg
gagttgtcgaaggcgattaacgacaacggcatcgtcgcggcggcggttctttcgggcaac
cgcaattttgaaggccgtgtcagccctgacgtgcaggcaaactatctcgcctcgccgccg
ctcgtcgtcgcgcatgcgttggcggggaccgtgctcaaggatctgacgaaagatccaatc
ggaaccggcagcgacggcaaggccgtctatctcaaggacatctggccgacctcgcaggaa
atccagaagttcatcgccgagaacatcacgcgcgacatgttcaaggcgcgctacgccgac
gtgttcaagggtgacacgaactggcagtcgatcgcgatcggcggcgggctcacctacggc
tggaacggcgagtcgacctacgttcagaacccgccctacttccagagcatcgcgcgcgat
gcgaagccggtcggcgatgtcgtgaatgcgcgcattctcgggctgttcggcgacaagatc
accaccgaccacatctcgcccgccggatcgatcaagacgtccagcccggccggacgctat
ctgctcgatcacggcgtgcagcccgtcgacttcaaccagtacggtacgcggcgcggcaac
cacgaagtcatgatgcgcggcacgttcgccaacatccgcatcaagaacgcgatggtgaag
gacgccaacggcaacgtgaaggaaggcggcctgacgatccattatccgtcgggcaaggag
atggcgatctacgatgccgccatgctctacgaacaggagaacgtgccgctggtcgtgttc
gccggtatcgaatacggcaacggctcatcgcgcgactgggcagcaaaaggcaccaacctg
cttggcgtgcgcgccgtcgttgcgcagtcgttcgagcgcatccatcgttcgaacctcgtc
ggcatgggcgtcgcgccgttcacgttccaggatggcacctcgtggcagacgctcgggctc
aagggcgacgagacggtcacgatccggggcctcgccaaggtgaagccgcgcgagaccgtc
aatctgtcgatcacgcgggccgatggaacgtcgtttgacgtgccggtgctctgccgtatc
gatacgctggacgagatcgagtacttcaagaacggcggcattctgcattacgtgctgcgc
aatctggcggcgtaa
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