Hyphomicrobium denitrificans ATCC 51888: Hden_3270
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Entry
Hden_3270 CDS
T01265
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn03030
DNA replication
hdn03430
Mismatch repair
hdn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hden_3270
03430 Mismatch repair
Hden_3270
03440 Homologous recombination
Hden_3270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdn03032
]
Hden_3270
03400 DNA repair and recombination proteins [BR:
hdn03400
]
Hden_3270
Enzymes [BR:
hdn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hden_3270
DNA replication proteins [BR:
hdn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Hden_3270
DNA repair and recombination proteins [BR:
hdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Hden_3270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ADJ25063
UniProt:
D8JWV5
LinkDB
All DBs
Position
complement(3343474..3344187)
Genome browser
AA seq
237 aa
AA seq
DB search
MREIVLDTETTGLDPKTGDRLIEIGGIEIINRIPTGVEFHRFINPERNVPMEAQNVHGIS
TEFLIGKPLFREVYRDFLAFIGDDILVIHNAQFDVNFLNHELGLVGEKPLSFDRVVDTLA
LARRRHPAGPNSLDALCKRYGIDTSQRTKHGAIVDSLLLAEVYVELLGERQATFGLQTIG
SGAATSERRNGKRAAAKQRPEPLPSRLTEADLVAHRSFIEKMGAKAIWNRFWGAVTS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaatcgtgctcgataccgaaacgacgggtctcgatccgaaaaccggcgaccgc
ctgatcgaaatcggcggcatcgagatcatcaatcgcatcccgacaggcgtcgagtttcac
cgcttcatcaatcccgaacgcaatgtgccgatggaggcgcagaacgtccacggcatctcg
accgaattcctgatcggcaagccgctgttccgcgaagtctatcgcgatttcctggcgttt
atcggcgacgacatcctcgtcattcacaacgctcagttcgacgtcaacttcctcaatcac
gagctgggtcttgtcggcgagaaaccgctgagcttcgatcgcgtcgtcgacacgctggcc
ttggcgcgccgccgtcatccggccggtccgaactcgctcgacgcgctctgcaagcgttac
ggcatcgacacttcccagcgcacgaagcacggcgccatcgtcgacagtctgcttctcgcg
gaagtctacgttgaactgcttggcgagcgtcaggcgacgttcgggctgcagacgatcggc
agtggcgcggcgaccagcgaacgccgtaacggcaaacgcgcagccgcgaagcaacggccc
gaaccgctgccgtcccggctgaccgaagcggacctcgtcgcgcatcgcagcttcatcgaa
aagatgggcgcgaaggcgatctggaaccgcttctggggagcggttacgtcctga
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