Hyphomicrobium denitrificans ATCC 51888: Hden_3280
Help
Entry
Hden_3280 CDS
T01265
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdn03016
]
Hden_3280
Transfer RNA biogenesis [BR:
hdn03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Hden_3280
Prokaryotic type
Methyltransferases
Hden_3280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
HflX_C
AAA_28
MeaB
RsgA_GTPase
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADJ25073
UniProt:
D8JWW5
LinkDB
All DBs
Position
3353861..3355195
Genome browser
AA seq
444 aa
AA seq
DB search
MYEYANAMTDASTIFALSSAPGRAALSVIRISGPAVRNVLETMTAPVPKPRVAAFRTIRH
PDTGEALDRAVVLWFAAPNSETGEDVAEFQGHGSRAAVAAILGALGTVKGCRLAEPGEFA
RRGFENGKMDLAEIEGLGDLIEAETEAQRRQALAQSSGTLSKLYESWRTRLIEIAALTEA
AIDFSDEGDVSASSFADARKRADALSAEIGAHLDDGHRGEIVRDGFRVALLGAPNAGKSS
LLNALAKRDAAIVSEEAGTTRDVIEVRLDLAGLPVVVSDTAGIREAESLVEQEGIRRSLA
AARDADLVVWLSEAGDSTPPEPISRETSLAIRSKADLCRESTADLLAVSAVTGEGLDRLV
AEIARRASEAVGTRTDPALTRVRHRQSLEAARDEIQAFLNGDSGAVELRAEDVRRAAHAI
GRITGRVDVEDVLDQVFSRFCIGK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagtacgcgaatgccatgactgatgcttcaactatctttgcgctttcgagcgca
ccgggacgtgcggcgctgtccgtcattcgtatttccggtccggccgtgcggaacgtgctg
gagacgatgacggcgccggttccgaaaccgcgcgtcgcagcattccggaccatccggcat
ccggacaccggggaagcgctcgatcgtgcggtggtattgtggttcgcggcacccaacagc
gaaacaggagaagacgtcgccgagttccaggggcatggcagccgggctgcggtcgctgcc
atcctcggtgcgctgggaacagtcaaaggatgccgcctggcggaacccggcgaattcgcg
cgccgcggcttcgagaatggcaagatggatctggccgagatcgaaggtcttggcgatctc
atcgaggcggagacggaagcccagcgccggcaggctttggcacaatcgtcggggacgctg
tcgaagctctacgagagctggcggacgcggttgatcgagattgcggcattgaccgaggcg
gcgatcgacttttccgacgaaggggacgtttcggcgtcgtcgtttgcagacgcgcgaaag
cgggcggatgcgctgtcggcggaaatcggcgcgcatctcgatgacgggcatcggggcgag
atcgtgcgcgacgggtttcgcgtggcgcttctcggggctccgaatgcgggcaagtcgagc
ctgctgaacgcgctggcgaagcgcgacgccgcgatcgtgtcggaggaagccgggaccacg
cgcgacgtgatcgaggttcggctggatctggccggtttgccggtggtcgtctcggacacc
gccggaattcgcgaagcggagagcctggtcgagcaggagggcattcggcgcagtcttgcc
gccgcccgtgatgccgatctcgtagtttggttgagcgaggcgggcgactcaacgcctccc
gagccaatttcacgtgaaacaagccttgcaattcgttccaaagctgatctttgccgggaa
tcaacagcagatttgctggcggtctcggctgtaaccggcgagggcctggaccggctggtg
gctgagattgcccggcgtgccagcgaggccgtcgggacgcggacggacccagcgttgacg
cgggtgcggcaccggcaaagcctcgaagcggccagggacgagatccaagcgtttctgaac
ggggattctggagcggtcgagctccgggctgaggacgttcggcgggcggctcatgccatc
gggcgaattacgggccgcgtcgatgtcgaggacgtgctggatcaggttttcagccggttc
tgcatcgggaaatga
DBGET
integrated database retrieval system
