Hyphomicrobium denitrificans ATCC 51888: Hden_3384
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Entry
Hden_3384 CDS
T01265
Name
(GenBank) chaperone protein DnaK
KO
K04043
molecular chaperone DnaK
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hden_3384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hdn03019
]
Hden_3384
03110 Chaperones and folding catalysts [BR:
hdn03110
]
Hden_3384
03029 Mitochondrial biogenesis [BR:
hdn03029
]
Hden_3384
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hdn04147
]
Hden_3384
Messenger RNA biogenesis [BR:
hdn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Hden_3384
Chaperones and folding catalysts [BR:
hdn03110
]
Heat shock proteins
HSP70 / DNAK
Hden_3384
Mitochondrial biogenesis [BR:
hdn03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
Hden_3384
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Hden_3384
Exosome [BR:
hdn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Hden_3384
Exosomal proteins of breast cancer cells
Hden_3384
Exosomal proteins of colorectal cancer cells
Hden_3384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
FGGY_C
Motif
Other DBs
NCBI-ProteinID:
ADJ25177
UniProt:
D8JXJ6
LinkDB
All DBs
Position
complement(3450957..3452882)
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AA seq
641 aa
AA seq
DB search
MSKVIGIDLGTTNSCVAVMEGGKPKVLENSEGANTTPSVVAFTSDDERLVGLPAKRQAVT
NPTNTFFAIKRLIGRRFDDPEVQKDVKLVPFNIVKGTNGDAWVESHGKQYSPQQISAFIL
QKMKETAEAKLGEKVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYG
LDKKKEAKTIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTHLGGEDFDMVLVSYLADEF
KKEQGIDLRSDKLALQRLKEAAEKAKIELSSAPQTEINLPFITADASGPKHLTMKLTRAK
LESLVETLINRTKGPCEKALKDAGLKAAEIDEVVLVGGMTRMPKVQEVVKQLFGKEPHKG
VNPDEVVAVGAAIQGGVLKGEVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKGQ
TFSTAEDGQNAVTIRVFQGEREMAADNKMLGQFDLLGIPPAPRGVPQIEVTFDIDANGIV
HVSAKDKATGKEQSIRIQASGGLSDADIDKMVKDAEAHAAEDKQRREVVELRNQAEALVH
GTEKSLSENESIPAVAAIKGDVESAIAATKTAIAGEDAEAIRSATTALTQVAMKIGEAVY
TAKGGAAGVEGEEPSAEKSAGGEDVVDADFEEVKDDRKKSA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtaatcggtattgacctcggcacgaccaactcatgcgtcgctgtcatggag
ggcggaaagccgaaggttctggagaattccgagggcgcgaacacgacgccgtccgtcgtt
gcatttacgtccgacgacgagcgtctcgtcggcttgccggccaagcgccaggctgtgacg
aaccccacgaacaccttcttcgccatcaagcgtttgatcggccgccgcttcgacgacccg
gaggtccagaaggacgttaagctggtcccgttcaatatcgttaaaggtaccaacggcgac
gcctgggtcgaaagccacggcaagcagtattccccgcagcagatctctgcgttcatcctt
cagaagatgaaggaaaccgccgaagccaagctcggcgagaaagtcacgcaggccgtcatc
accgttccggcgtacttcaacgacgctcagcgccaggcgaccaaagacgccggcaagatc
gccggtcttgaagtgctgcgcatcatcaatgagccgacggcagccgcgctcgcttacggt
ctcgacaaaaagaaagaagccaagaccatcgcggtctacgacctcggcggcggcacgttc
gacgtgtcgatcctcgagatcggtgacggcgtcttcgaagtgaagtcgacgaacggtgac
acgcacctcggcggcgaagacttcgacatggtgctggtcagctacctcgctgacgagttc
aagaaggagcagggcatcgatctccgctccgacaagctggctctgcagcgcctgaaggaa
gccgctgaaaaggccaagatcgaactgtcgagcgccccgcagaccgaaatcaacctgccg
ttcatcacggccgacgcttcgggtccgaagcatctgacgatgaagctgacgcgcgccaag
ctcgaaagcctcgtcgaaacgctgatcaatcgcacgaaaggtccttgcgaaaaggccctg
aaggacgctggcctgaaggctgccgaaatcgacgaagtcgttctcgtcggcggcatgacg
cgcatgcccaaggtccaggaagtcgtgaagcagctgttcggcaaggagccgcacaagggc
gtcaaccccgatgaagtcgtggccgtcggcgccgcgatccagggcggcgtcctgaagggc
gaagtcaaggacgtgctgctgctcgacgtgaccccgctgtcgctcggcatcgagacgctt
ggcggcgtgttcacacgcctgatcgatcgcaacacgacgatcccgaccaagaagggtcag
acgttctcgacggcggaagacggccagaacgccgtgacgatccgcgtgttccagggcgaa
cgcgagatggctgccgacaataagatgctcggccagttcgatcttctcggcatcccgccc
gctccgcgcggcgtgccgcagatcgaagtgacattcgacatcgacgccaacggcatcgtc
catgtgtccgcgaaggacaaggcgaccggcaaggaacagtcgatccgcatccaggcatcg
ggcggtttgtccgacgccgacatcgacaagatggtcaaggacgcggaagcccacgcggcc
gaagacaagcagcggcgcgaggtcgtcgagcttcgcaaccaggccgaagcgctcgtccac
ggcaccgagaagtcgctcagcgaaaacgagtcgatcccggctgtcgcggcgatcaagggt
gacgtcgaaagcgccatcgctgccaccaagaccgcgattgcaggtgaagacgccgaggcg
atccgctccgcaaccacggctctgacgcaggttgcgatgaagatcggcgaagccgtctac
accgccaaaggcggcgcggccggcgtcgaaggcgaggagccatctgctgagaagtccgcc
ggcggcgaagacgtcgtcgacgcggatttcgaggaagtcaaagacgataggaagaaatcg
gcttaa
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