Hyphomicrobium denitrificans ATCC 51888: Hden_3398
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Entry
Hden_3398 CDS
T01265
Name
(GenBank) Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hdn03009
]
Hden_3398
Enzymes [BR:
hdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
Hden_3398
Ribosome biogenesis [BR:
hdn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Hden_3398
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
DUF3834
HTH_22
Motif
Other DBs
NCBI-ProteinID:
ADJ25191
UniProt:
D8JXL0
LinkDB
All DBs
Position
3464119..3465060
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AA seq
313 aa
AA seq
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MLVSRDPKPADRQQNPAQTSKVADRAREALEDLAGAPLASGIYLVATPIGNLADITLRAL
AVLSRADIVYCEDTRHSAKLLQHYSIAAKTLPLHEHNEDREIERVLSEAEAGKRIAIISD
AGTPLLSDPGFRLVRTAASRGIRVTSIPGASAVLTALTTSGLPTDAFFFAGFLPPKQAAR
RTRLAEIANIPSSLVIFEAPHRVQEALADMADVLGNRAAVVARELTKLHETIARGTLSAL
ADDFAGSVLKGEIVIVIGPAEPQVVSDDAISTRLDEVLGAMSLKDAAKTIAGELGVPKSR
VYALGVKAKDESP
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgtccagagatccaaaaccggcagacaggcagcaaaacccggcgcagacgtca
aaggtcgcggatcgcgcgcgcgaggcgcttgaggacctcgccggagcgccgcttgcgtcg
gggatttatctcgtcgcaacgccaattgggaatctcgccgacatcacgctcagagcgctg
gctgttttatcgcgcgccgatattgtctactgcgaggacacgcgccattcggcgaagctg
cttcagcattacagcatcgcggcgaagacgctgccgctgcacgaacacaacgaagatcgt
gagatcgagcgcgtcttaagcgaagcggaggccggcaagcgcatcgcgatcatttccgat
gccggaacgccgttgctttcggatcccggctttcggcttgtccggacggccgcgtcgcgc
ggaattcgtgtcacctcgatacctggcgcgtcggcggtgctcacggcgctgacgacgagc
gggttgccgacggacgcgtttttcttcgcaggcttcctgccgccgaagcaggcggcgcgg
cgcacgcggcttgctgaaatcgcaaatattcccagttctctcgtgattttcgaagcaccg
catcgcgtccaggaggcgcttgccgacatggcggacgtgctgggcaatcgcgccgcggtc
gtcgcccgggaactgacgaagctgcacgaaacgattgcgcggggcacgctgagcgcgctt
gcggatgacttcgcgggctcggtcttgaagggtgagatcgtcatcgtcatcggaccggcg
gaaccgcaggttgtcagcgacgatgcgatcagcacgcggctcgatgaagtgctcggcgcg
atgagcctcaaggatgccgcgaaaacgatcgccggcgaacttggtgtgccgaagtcgcgg
gtctatgcgttgggcgtcaaggcgaaggatgaaagtccgtga
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integrated database retrieval system
