Hyphomicrobium denitrificans ATCC 51888: Hden_3499
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Entry
Hden_3499 CDS
T01265
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdn03016
]
Hden_3499
Enzymes [BR:
hdn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Hden_3499
Transfer RNA biogenesis [BR:
hdn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hden_3499
Prokaryotic type
Hden_3499
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Phage_attach
Motif
Other DBs
NCBI-ProteinID:
ADJ25290
UniProt:
D8JY86
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All DBs
Position
3576507..3577427
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AA seq
306 aa
AA seq
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MGRRKKGSPVHGWLVLDKPQNMTSTQAVGIVRRVFNAQKAGHSGTLDPLATGILPIALGE
ATKTVSFAVDGEKAYRFTVRWGAETETDDTEGAIANTSDQRPDRASIEALLPQFHGEIMQ
VPPAYSAIKVDGARAYDLARDGETVVLNARPVFIDSLQLVDMPDAATSVFEARCGKGTYV
RALARDMGRLLGCYGHVIALRRTQVGPFDEAIAVAMDDLKAASDANDPEQLLRFLQPVEA
ALADLPELLVSQSDAASLARGQTVLIRGRDAPILSGPAYATSKGRLIALGELAKGALHPT
RVFNLG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgggacgccgcaaaaagggatcaccggttcatggctggctggtgctcgacaagcctcag
aacatgacgtcgacgcaggccgtcggcatcgtccggcgcgttttcaatgcgcagaaggca
gggcattcgggaacgctcgatccgctggccacaggcattctgccgatcgcactcggggag
gcgacgaagaccgtttcgttcgcggtcgatggcgagaaggcgtatcgcttcacggtgcgc
tggggcgctgaaaccgaaacggacgataccgaaggcgcgattgcgaacaccagcgatcag
cgtccggatcgggcaagcatcgaagcattgctgccgcagtttcacggcgagatcatgcag
gtgccgccggcctattcggcgatcaaggtcgacggagcgcgggcttacgatctcgcgcgt
gacggcgaaacggtcgtgctcaatgcgcgtccggttttcatcgatagtctgcaactcgtc
gatatgccggatgcggcgacgagcgtgttcgaggcgcgttgcggcaagggaacgtatgtg
cgtgcgctggcgcgcgacatgggccgtctgctcggctgctacggtcacgtcatcgctttg
cggcgaacgcaggtcggtccgttcgacgaagccatcgcggttgcgatggatgatttgaag
gcggcatcggatgcaaacgatcccgagcagttgttgcgctttctgcaacccgtcgaagcg
gcgctcgccgatttgccggagctgctcgtgtcgcaaagcgacgcggcaagtctcgcacgc
gggcagacggtgttgatccggggacgggacgcaccgatcctttcgggaccggcttatgca
acgtccaaagggcgtctgatcgcgctcggtgaacttgccaaaggcgcgctgcatccgacg
cgcgtgtttaatctcggctga
DBGET
integrated database retrieval system
