Halococcus dombrowskii: MUK72_01175
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Entry
MUK72_01175 CDS
T08074
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hdo
Halococcus dombrowskii
Brite
KEGG Orthology (KO) [BR:
hdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdo03016
]
MUK72_01175 (endA)
Enzymes [BR:
hdo01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MUK72_01175 (endA)
Transfer RNA biogenesis [BR:
hdo03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MUK72_01175 (endA)
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
UOO95338
UniProt:
A0AAX3AN02
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All DBs
Position
complement(223943..224968)
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AA seq
341 aa
AA seq
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MEGTLDGGVVRVGGDARQRFYDSSGYGRPDGAGVVLAPVEAAHLLFRDDLDAVDGMDLGK
FLAATDCVVRFLVYKDFRERGFYLSPAREGWVDADDARAGADLVVYPQGNGPWDDAIAYR
VRVVGERAAVPASDLGDVVLAVVDEESEITYLDTSRPEMVGHTDYDPPSEVAADLLEDRT
VLWNPPDDLYERAFYGQRLAGRGAEGGPLQLSLVETAYLVREGVLDLDGGAETVVERGRA
VEGERFDRRLAVYATLRSEGLVPKTGFKFGADFRTYADVESVENLGHSEFLVRVLPTEYA
FGPRELSLDVRLAGGVHKRMAFALTDTNGDIDWLAVERITP
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcacgctcgacggcggcgtcgtccgggtcggcggcgacgcgcgccagcggttc
tacgactccagtggctacggtcgacccgacggggcgggcgtcgtgctcgcgccggttgag
gccgcccacctgctctttcgcgacgatctcgacgcggtcgacggaatggatctcgggaaa
tttctcgccgcgaccgactgtgtggtccgctttctggtctacaaggacttccgcgagcgc
ggcttctacctctcgcccgcgcgcgagggctgggtggacgccgacgacgcacgggcgggc
gcggacctcgtggtctacccgcagggcaacgggccgtgggacgacgcgatcgcctaccgc
gtgcgcgtcgtcggcgagcgcgcggcggtgcccgcgagcgatctcggcgacgtcgtgctc
gccgtcgtcgacgaggagagcgagatcacctatctcgacacctcacgccccgaaatggtg
ggacacaccgactacgatcccccgagcgaagtcgccgccgacctgctggaggatcgaacc
gtgctctggaacccacccgacgatctctacgaacgggcgttctacggccagcgactcgcc
ggtcgcggggccgagggcggtccgctccagctctcgctggtcgagactgcctaccttgtg
cgcgagggagtgctcgacctcgatggcggggccgaaacggtcgtcgagcgcgggcgagcg
gtcgagggcgagcggttcgaccgtcggctggcggtctacgcgacgctccgctccgaggga
ctcgtccccaaaaccgggttcaagttcggtgcggacttccggacgtacgcggacgtcgag
tcggtcgagaacctcggtcattcggagttcctggtgcgcgtgcttcccacggagtacgcc
ttcggtccacgggaactctcgctcgacgtgcggctcgccggcggggtccacaagcgaatg
gcttttgcgctgaccgacacgaacggtgacatcgactggctcgccgtcgagcgaatcaca
ccatga
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