Halococcus dombrowskii: MUK72_05200
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Entry
MUK72_05200 CDS
T08074
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hdo
Halococcus dombrowskii
Brite
KEGG Orthology (KO) [BR:
hdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdo03032
]
MUK72_05200
03400 DNA repair and recombination proteins [BR:
hdo03400
]
MUK72_05200
Enzymes [BR:
hdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MUK72_05200
DNA replication proteins [BR:
hdo03032
]
Prokaryotic type
DNA Topoisomerases
MUK72_05200
DNA repair and recombination proteins [BR:
hdo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MUK72_05200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DNA_pol_lambd_f
DUF4332
Cdd1
IMS_HHH_1
HHH
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UOO96105
UniProt:
A0AAV3SDV9
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Position
969300..971783
Genome browser
AA seq
827 aa
AA seq
DB search
MELLITEKETAASNIAEILSEGSADVERRNGVNVYKWGGRRCVGLSGHVVENDFPPEYAN
WRDVEPVELLDADVVVEPHESRENIVRTLRLLARDANGVIIATDYDREGELIGKEAADIV
REVSDAPIKRARFSSFAEREVREAFHNLDDLDYDLAAAGEARQEIDLVWGAALTRFLSLT
AKQRGNDFISVGRVQSPTLKLIVDRERKIQAFDPETYWELFSDLLKDETTFEVQYFDRED
GRGTDRLWDESVAAEVYDALGEASAATVQEVSRRTRADDPPHPFNTTQYIRAASSLGYSA
QRAMSLAEELYTAGYITYPRTDNTVYPDDLDIEELLEEFTNHREFGDDAEALLEAEELSA
TEGDEETTDHPPIHPTGELPSASELGDDEREIYELVVRRFFATVADPAKWEHLRVTAAID
EHHLKANGKRLVDPGYHAVYPYFNTSENHVPELDEGEELPIEDVRSEEKETQPPRRRGQS
RLIERMETMGIGTKATRHNTIEKLYDRGYIESDPPRPTKLAEAVVEAAEQYADRVVSEEM
TSQLETDMAAIADGETALDDVTQESREMLETVFDTLRDSREEVGEHLRKSLKADKTLGPC
PDCGADLLVRKSRHGSSFVGCDGYPDCEFTLPLPSAGEPLILDETCDEHDLRNVKMLDGR
STFVHGCPLCAAEEADAEADRVIGDCPECGSEHGGELAIKTLRTGSRLVGCTRYPDCEYS
LPLPRRGEIEVTDEFCDEHDLPELVVHSGDEPWELGCPICNYHEYQARQSVGDLVDLDGV
GEKTVEKLAAVGVESLDDLRESEADSIAESVQGVSAENVRSWQAKAD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
gtggagctgttgataaccgagaaggagaccgccgcgagcaacatcgccgagatcctgagc
gagggcagcgccgacgtcgagcgacgaaacggcgtcaacgtctacaagtggggtggacga
cgctgtgtcggcctctcgggccacgtcgtcgagaacgacttcccgcccgaatacgcgaac
tggcgcgacgtcgaaccggtcgaactgctcgatgccgacgtggtggtcgagccacacgag
agccgcgagaacatcgtccgcacgctcaggctgctcgcgagggatgccaacggcgtcatc
atcgccaccgactacgaccgcgagggcgaactgatcggcaaggaggccgccgacatcgtt
cgcgaggtctccgacgcgccgatcaagcgtgcacggttttcgtcctttgccgagcgcgag
gtgcgcgaggcgttccacaatctcgacgacctggattacgacctcgcggcggcgggcgaa
gcccgccaggagatcgacctcgtgtggggcgcggcgctgacccgattcctctcgttgacc
gccaaacagcgcggcaacgacttcatcagcgtcggccgggtccagtcgccgaccctcaaa
ctcatcgtcgatcgcgagcggaagatccaggcgttcgatcccgagacctactgggaactg
ttcagcgaccttctcaaggacgaaaccaccttcgaggtccagtatttcgaccgcgaggac
ggtcgcggtaccgaccgcctctgggacgaatcggttgcggcggaggtctacgacgctctc
ggcgaggcgagtgcggcgacggtccaagaggtcagccggcgcacccgtgccgacgacccg
ccccatccgttcaacacgacccagtacatccgtgcggcgagttcactcggctactccgca
cagcgcgcgatgagcctcgccgaggagctctacacggcgggctacatcacctatccgcga
accgataataccgtctaccccgacgatctcgacatcgaggagctcttagaggagttcacg
aaccaccgcgagttcggcgacgatgcagaggccctgctggaagccgaggagctttcggcc
accgagggcgacgaggagacgactgaccacccgccgatccatccaacgggcgagctcccg
tcggcgtccgaactcggcgacgacgaacgcgagatctacgagctggtcgtcaggcgcttt
ttcgcgacggtggccgatcccgccaagtgggagcatctccgcgtgaccgccgccatcgac
gagcaccacctgaaggccaacggcaagcgactcgtcgatccgggctaccacgccgtctat
ccgtatttcaatacctcggagaaccacgtgccggaactcgacgagggcgaggagctcccg
atcgaggacgtgcgctccgaggagaaggagacccagccaccgcgtcggcgcggccagtcc
agactcatcgagcgcatggagacgatgggcatcggcacgaaggcgacccgtcacaacacg
atcgagaagctctacgatcggggctacatcgagagcgacccgccccgcccgacgaaactc
gccgaggcggtcgtcgaggcggccgagcagtacgccgaccgcgtggtgagcgaggagatg
acgagccagctcgaaaccgacatggccgccatcgccgacggtgagacggctctcgacgac
gtcacccaggaatcgcgcgagatgctcgaaaccgtgttcgacacgctccgcgactcgcgc
gaggaggtcggcgaacatctccgcaagtcgctcaaagccgacaaaacgctggggccgtgt
cccgactgtggcgcggacctgctcgtgcgaaagagtcgtcacggctcctcgttcgtcggc
tgtgacggctatcccgactgcgagttcacgctgccgctcccctcggctggcgagccgctg
atcctcgacgaaacctgcgacgagcacgacctgcggaacgtgaagatgctcgacggtcgg
agcacgttcgtgcatggctgtccgctctgtgccgccgaggaggccgacgccgaggccgac
cgcgtcatcggggactgccccgagtgcggctcggagcacggtggcgaactcgcgatcaag
accctcaggaccggttcgcggctcgtcggctgcacgcgctaccccgactgcgagtattcg
ctcccgctcccgcgccggggcgagatcgaggtcaccgacgagttctgcgacgagcacgac
ctgcccgaactcgtcgtccacagcggcgacgagccctgggagctcggctgtccgatctgt
aactaccacgagtatcaggcccggcagtcggtcggcgacctcgtggatctcgatggggtc
ggcgagaagaccgtcgagaaactggcggcggtcggcgtcgagagcctcgacgatctgcgc
gaaagcgaggccgattcgatcgccgaatcggtccagggcgtgagcgccgagaacgtccgt
agctggcaagcgaaggccgactga
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