Halococcus dombrowskii: MUK72_05340
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Entry
MUK72_05340 CDS
T08074
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hdo
Halococcus dombrowskii
Brite
KEGG Orthology (KO) [BR:
hdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdo03016
]
MUK72_05340 (truD)
Enzymes [BR:
hdo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MUK72_05340 (truD)
Transfer RNA biogenesis [BR:
hdo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MUK72_05340 (truD)
Prokaryotic type
MUK72_05340 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UOO96133
UniProt:
A0AAX3AQV9
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All DBs
Position
994172..995554
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AA seq
460 aa
AA seq
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MREAHPSERAVGIDHYVSDGDGTGGKFRTRPEDFRVRELETGEFEPLDADPNAYPHLVFR
ATLENWDTNDFASALSSQLEMSRERIDWAGTKDKRAVSTQLFSVRAGSDALDDIDLRGAT
IDLVGRAGRGLRFGDLAGNAFEIVVREADTESVERITESLRSFAGNEDGNAGDTNGEDGT
TVGVPNYFGQQRFGSYRPVTHEVGLAVVRDDWREAVLAYVGRPHESEPEATREARAFVDS
EATAAGTADWEAALDRYPRQLGFERSMLHRLVENGGESSDDFRAALETVPSNLQRLFVNA
AQSYLYNRILSARLDQGLPFDRAVAGDVVCFADSEAPDGLALPDPDRSQRVPENRVETVN
RHTARGRAFVTAPLVGTETELANGEPGAIERAILDEEGIEPSLFDLPGEFHSTGTRRAIL
LTTDLSIEDDPLTFAFQLPKGSYATVLLREYLKSEPTAMR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggcccatccgagcgaacgggcagtcggcatcgaccactacgtcagcgatggc
gacggtacgggtgggaaattccgtacgcgcccagaggatttccgcgtacgtgaactcgaa
acgggtgagttcgaaccgctcgacgccgatccgaacgcctatccccatctcgtctttcga
gcgacgctcgagaactgggacacgaacgatttcgcgagcgcgctctccagtcagttggaa
atgagccgcgagcggatcgactgggcgggcacgaaggacaagcgcgccgtcagcacccaa
ctgttctccgtgcgtgctggaagcgacgcgctcgacgacatcgatctccgcggagcgacg
atcgacctggttgggcgcgccgggcgcggactgcgcttcggcgatctcgctggcaacgcc
ttcgagatcgtcgtccgcgaggccgacaccgaatcggtcgagcgaataacggaatcgctc
cgatcgttcgccggcaacgaggacgggaacgcgggcgacacaaacggtgaagacggtacg
acggtgggcgtgccgaactacttcggccagcagcggttcggttcctatcgcccggtgaca
cacgaggtcgggctcgcggtcgtccgcgacgactggcgagaagcggtgctcgcctacgtc
ggccgtccacacgagtcggagccggaagcgacccgcgaggcgcgcgcgttcgtcgatagc
gaggccacggcagcggggacggcggactgggaagcggcgctcgaccgctatccgcggcag
ttgggcttcgagcgctcgatgctccaccggctggtcgagaacggtggcgagagttcggac
gatttccgtgcggcgctcgaaaccgtcccgtcgaacctccagcggctgttcgtcaacgcc
gctcagtcctacttgtacaatcggattctctccgcacgcctcgatcaggggctgccgttc
gatcgtgcggtcgcgggcgacgtggtctgcttcgccgatagtgaggctcccgatggactc
gctctgcccgatcccgatagaagccaacgagtgcccgaaaaccgggtcgagacggtcaat
cgacacactgcacgtgggcgggcgttcgtcaccgcgccgctggtcggcaccgaaacggag
ctcgcaaacggcgagccgggtgccatcgagcgcgcaatactcgacgaggaagggatcgag
ccctcgctgttcgatctgccgggggagtttcactcgacgggcacccgacgggcgatactg
ctcacgaccgatctgtcgatcgaggacgatccgctcacgttcgccttccagttgccgaag
ggatcgtatgcaaccgtgctccttcgggaatacctgaagagtgagccgaccgcgatgcgc
tga
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