Halococcus dombrowskii: MUK72_07100
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Entry
MUK72_07100 CDS
T08074
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
hdo
Halococcus dombrowskii
Pathway
hdo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hdo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
MUK72_07100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdo03021
]
MUK72_07100
03019 Messenger RNA biogenesis [BR:
hdo03019
]
MUK72_07100
Transcription machinery [BR:
hdo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
MUK72_07100
RNA polymerase I system
MUK72_07100
Messenger RNA biogenesis [BR:
hdo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
MUK72_07100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
DUF6093
SH3_KIN17_C
KOW4_SPT5
Motif
Other DBs
NCBI-ProteinID:
UOO96464
UniProt:
A0AAV3SIB7
LinkDB
All DBs
Position
1352460..1352897
Genome browser
AA seq
145 aa
AA seq
DB search
MGMYAVKTTASQERTVADMIMEREAEDIHAALAPDSLTSYVMVEADDHAILERVLDEIPH
ARNLVPGESSIAEVEHFLSPKPDVEGIAESDIVELVAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSEER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggggatgtacgccgtcaagacgaccgcgagccaggagcgcaccgtcgccgacatgatc
atggagcgcgaggccgaggacatccacgccgcgctcgcgcccgactcgctgacgagctac
gtgatggtcgaggccgacgatcacgcgatcctcgaacgcgtgctcgacgagatcccccac
gcccgcaacctcgtccccggcgagtcctcgatcgcggaggtcgaacacttcctctcgccg
aaacccgacgtcgaggggatcgccgagagcgatatcgtcgagctcgttgccggcccattc
aagggcgagaaggcacaggtccagcgcatcgacgaggggaaggatcaggtgacggtggag
ctgtacgaggcgacggtcccgatccccgtcaccgttcgtggcgaccagatccgcgtgctg
gacagcgaggagcgctga
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