KEGG   Halococcus dombrowskii: MUK72_11540
Entry
MUK72_11540       CDS       T08074                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hdo  Halococcus dombrowskii
Brite
KEGG Orthology (KO) [BR:hdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hdo03400]
    MUK72_11540
Enzymes [BR:hdo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MUK72_11540
    5.6.2.6  RNA 3'-5' helicase
     MUK72_11540
DNA repair and recombination proteins [BR:hdo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MUK72_11540
SSDB
Motif
Pfam: DEAD DEAD_assoc Helicase_C WH_Lhr ResIII AAA_25 HypA Zn_ribbon_8
Other DBs
NCBI-ProteinID: UOO94596
UniProt: A0AAV3SF86
LinkDB
Position
2241590..2244427
AA seq 945 aa
MADSEAAADLAAFTHLGEQVRAALSERGFTTPTEPQRKAIPPLADGRDGLVIAPTGTGKT
ETAMLPVFDALAGQDRFGMQALYITPLRALNRDMRDRLDWWGEQLELDIDVRHGDTTQYQ
RGKQAEDPPDVLVTTPETLQAMLTGKKLRKALGDVSHVVIDEVHELAASKRGAQLTIGLE
RLRELAGEFQRIGLSATVGDPGEVGKFLTGGRECALIEVDVGSRLDVRVRKPRITDEDES
LAAELASDPDLASHVRAIRDLVAENESTLIFVNTRQTAEALGSRCNALDLPIGVHHGSLS
KEARIEVEDDFKAGELDGLLCTSSMELGIDVGRVDHVIQYQSPREVARLLQRVGRAGHRS
DRLSSGTVLTTRPDDTLEALAICRRAHEGLVEPAEIHHGSLDTVANQIVGFVMDFGEIGA
RQAYEIVTRAYPFRDLGEETFREIVRELSGNRILWLDEEQDQLEKSGGSWQYFYANLSMI
PDEETYTVSDVASGRTIGTLDERFVVNFAGPGETFIQRGEMWRIAEVNDEESEVKVSPIE
DPAGEIPSWTGQEIPVPRAVAGEVGEIRGTVGESFTDGASRAAVADDLAERYPTDEYTAN
EALDPLEKQIAADGPMPTENRVVIESEPRSVVVNACFGHTTNETLGRVLSALLGQRTGSS
VGMEIDPYRIELDVPRAVRGSDVVEILNETAAEHVAGLIELSLKNSDALKFKLAQVAATF
GALKSWQSDSRFGRGRLLAALEDTPVYDEAVREVFHDDLSIDDAGDVLSAIQSEGIELVT
HSGHTPVGIDGRSSGKELLAPENADASVIDTVRERIQEDRMRLFCLHCQEWERTQEVRRI
PDQPECPLCGSTRIAALNPWAEEVVEAIKTGEKDDEQEKQTERAYQAATLVQSHGKQAVI
ALAARGVGPHNAARIIAKLRENEDDFYRDILSQERQYARTQSFWG
NT seq 2838 nt   +upstreamnt  +downstreamnt
atggcagatagcgaggccgccgccgatttggcggccttcacacacctcggcgagcaggtc
agagcggcgctctccgagcgcgggttcaccaccccgaccgagccacagcgcaaggcgatc
ccaccgctggccgacggacgggacgggctcgtgatcgcaccgacgggcacaggaaaaacc
gagaccgcgatgctcccggtgttcgacgcgctcgcgggccaggaccggttcgggatgcag
gcgctctacatcaccccactcagggcgctcaaccgcgacatgcgtgatcggctcgactgg
tggggcgaacagttggagctcgacatcgacgtgcgccacggcgatacgacccagtatcag
cgcggaaagcaggccgaagacccgccggacgtgctcgtgacgacgcccgagacgctccag
gcgatgctcacggggaagaagctccgcaaggcgctcggggacgtctcgcacgtcgtgatc
gacgaagttcacgagctcgcggcgtcgaaacgcggcgcacagctcacgatcgggctcgaa
cgcctccgcgagctcgcgggggagttccagcgcatcggcctgtcggcgaccgtcggcgat
cccggcgaagtcgggaagttcctcaccggcgggcgcgagtgcgcgctcatcgaggtcgac
gtcggcagtcggctcgacgtccgggtgcgaaaaccacggatcaccgacgaggacgagagc
ctggcggcggagctcgcgagcgatcccgacctcgcgagccacgtacgggcgatccgcgat
ctcgtcgccgagaacgaatccacgctgatcttcgtcaacacgcgccagacggccgaagcg
ctcggctcgcgctgtaacgcgctcgatctgcccatcggtgtgcatcacggctcgctctcg
aaggaggcccggatcgaggtcgaggacgacttcaaagccggcgaactcgatgggttgttg
tgcacttcgtcgatggagctcggtatcgacgtgggccgtgtcgatcacgtgatccagtac
cagagcccgcgcgaggtcgcacgcctcctccagcgggtgggccgggcgggccatcgctcg
gaccgactctcgtccggcaccgtgctgaccacccgaccggacgacacgctcgaagcgctc
gccatctgccggcgcgcccacgaagggctggtcgagccagcggagatccaccacggcagc
ctggacacggtcgccaaccagatcgtcgggttcgtcatggatttcggcgaaatcggcgca
cgccaggcctacgagatcgtcacgcgcgcctacccgttccgcgatctcggcgaggagacg
ttccgcgagatcgttcgcgagctatcgggcaaccggatcctctggctcgacgaggagcag
gatcagctcgaaaagtcgggcggatcgtggcagtatttctacgccaacctctcgatgatc
cccgacgaggagacgtacacggtctcggacgtcgcctccgggcggacgatcggcacgctc
gacgaacggttcgtcgtcaacttcgccggcccgggcgagacgttcatccagcgcggcgag
atgtggcggatcgcggaggtcaacgacgaggagagcgaggtgaaggtcagcccgatcgaa
gaccccgccggcgagatcccctcgtggaccggccaggagatcccggtgccgcgggcggtc
gccggcgaggtcggcgagatccggggaacggtcggcgagtcgttcaccgacggcgcgtcg
cgggccgcggtggccgacgatctcgccgagcgctatccgaccgacgagtacaccgcgaac
gaggcgctcgacccgctcgaaaagcagatcgcggcggacggtccgatgccaactgagaac
cgggtcgtcatcgaatccgaaccccggtcggtcgtcgtgaatgcctgtttcggccacacg
accaacgagaccctcgggagggttctgtcggcgctgctcggccagcgaaccggctcctcg
gtgggtatggagatcgacccctatcgcatcgagctcgacgtgccgcgcgcggtgcgcgga
agcgacgtcgtggagatcctgaacgagacggccgccgagcacgtcgcgggactcatcgaa
ctcagcctcaaaaattcggatgcgctgaagttcaaactcgcgcaggtcgcggcgacgttc
ggcgcgctcaaatcctggcagagcgacagtcgattcggccgcggacggctgctcgcggcg
ctcgaagacacgccggtctacgacgaggccgtccgcgaggtcttccacgacgatctctcg
atcgacgacgccggcgacgtactctcggccatccagtccgaggggatcgagctcgtgact
cacagcggacacacccccgtgggaattgacgggcgctcgtcgggcaaggagctgctcgcg
cccgagaacgccgacgcgagcgtcatcgacacggtgcgagagcggatccaggaggatcgg
atgcggctgttctgtctgcactgccaggagtgggagcgcacgcaggaggtgcggcggatc
cccgatcagcccgaatgcccgctctgtggctcgacgcgcattgcggcgctcaacccgtgg
gccgaggaggtcgtcgaggcgatcaaaaccggcgagaaggacgacgagcaggaaaagcag
accgagcgcgcataccaggccgcgacgctcgtccaaagccacggcaagcaggcggtcatc
gcgctcgccgcccgcggcgtcggtccgcacaacgccgcccgcatcatcgccaagctccgc
gagaacgaggacgacttctaccgggatatcctctctcaggagcgccagtatgcacgcaca
cagtccttttgggggtag

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