Halococcus dombrowskii: MUK72_11805
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Entry
MUK72_11805 CDS
T08074
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hdo
Halococcus dombrowskii
Pathway
hdo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MUK72_11805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hdo03019
]
MUK72_11805
03009 Ribosome biogenesis [BR:
hdo03009
]
MUK72_11805
04131 Membrane trafficking [BR:
hdo04131
]
MUK72_11805
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hdo04147
]
MUK72_11805
Messenger RNA biogenesis [BR:
hdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MUK72_11805
Ribosome biogenesis [BR:
hdo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MUK72_11805
Membrane trafficking [BR:
hdo04131
]
SNARE
SNARE associated proteins
Others
MUK72_11805
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MUK72_11805
Exosome [BR:
hdo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MUK72_11805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
TIP49
AAA_14
AAA_22
AAA_33
RNA_helicase
NPHP3_N
nSTAND3
AAA_28
AAA_7
Mg_chelatase
ABC_tran
IstB_IS21
DUF815
AAA_lid_PRS2_C
NB-ARC
AAA_3
Sigma54_activat
Parvo_NS1
AAA_17
AAA_18
TsaE
PhoH
AAA_24
SLFN-g3_helicase
AAA_11
NACHT
AAA_19
Zeta_toxin
AAA_30
bpMoxR
Bac_DnaA
ATPase_2
ATP-synt_ab
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
UOO94648
UniProt:
A0AAV3SF93
LinkDB
All DBs
Position
complement(2292889..2295159)
Genome browser
AA seq
756 aa
AA seq
DB search
MNLTIKPLKQKDAGRGLAAVDRAAMDELDLENGDYILIEGSEGRAIARVWPGYPDDQGQG
VIRIDGQLRSEAQVGIDDRVSVEKAEVKPAQSVTVALPQNLRIRGNIGPYVQDKLSGQAL
TQGQTIPFSLGFGPFSGGSGQRIPLRIAETNPDGTVIVAENTDIEISEKPAEEIVSDAGD
GGDSATTPSVTYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGK
TLIAKAVANEIDAHFETISGPEIMSKYYGESEEQLREMFDNAEENEPAIVFIDEIDSIAP
KRDETSGDVERRVVAQLLSLMDGLEERGQVTVIAATNRVDAIDPALRRGGRFDREIEIGV
PDKEGRKEILQVHTRGMPLADGIDLDTYAESTHGFVGSDIESLAKESAMNALRRIRPELD
LDEEEIDAEVLESLQVTRDDLKSALKGIEPSALREVFVEVPDVTWESVGGLDDTKERLRE
TVQWPLDYPEVFEAMDMNAAKGVMMYGPPGTGKTLLAKAIANEAQSNFISIKGPELLNKF
VGESEKGVREVFSKARENAPTVIFFDEIDAIAGERGRNMGDSGVGERVVSQLLTELDGLE
ELEDVVVIATSNRPDLIDSALLRPGRLDRHVHVPVPDEDAREAIFEVHTRDKPLADDVDL
ADLARRTEGYVGADIEAVTREAAMAATRELIQTVDPEDLDGSVGNVRIEDEHFDQALDDV
TPSVTAETKERYEEIEDRFDSGEPATEEREVGRTFQ
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcacgatcaaaccgctcaaacagaaggacgccgggcgtggactggcggcggtc
gaccgcgcggcgatggacgaactcgacctcgaaaacggcgactacatcctgatcgagggc
agcgagggccgcgccatcgcacgcgtctggcccggctaccctgacgaccagggacagggc
gtgatccgcatcgacggccagctccgtagcgaggctcaggtcggtatcgacgaccgcgtg
agtgtcgagaaggccgaggtcaagcccgctcagtcggtcacggtggcgctgcctcagaac
ctccgcatccgagggaacatcggcccctacgtccaggacaagctctcgggacaggccctc
acgcagggtcagacgatcccgttctcgctcggcttcgggccgttctctggtggttcgggc
cagcgcatccccctcaggatcgccgaaacgaaccccgacggcacggtgatcgtcgccgag
aacaccgacatcgagatcagcgagaaaccagccgaggagatcgtctccgacgctggcgat
ggcggcgacagcgccaccaccccctcggtgacctacgaggacatcggcggactggaccgc
gagctcgaacaggtccgcgagatgatcgagctgccgatgcgccaccccgagctgttccag
cagttgggcatcgaaccgccgaagggcgtgctgctccacggcccgcccggcaccggcaag
acgctcatcgccaaggcggtcgccaacgagatcgacgcccacttcgagacgatctcgggg
cccgagatcatgtcgaaatactacggtgaaagcgaggaacagctccgcgagatgttcgac
aacgccgaggagaacgagccggcgatcgtcttcatcgacgagatcgactcgatcgcgccc
aaacgcgacgagacctccggcgacgtcgagcgccgcgtcgtcgcacagctcctcagcctg
atggacgggctcgaagagcgcggccaggtgacggtgatcgccgcgaccaaccgtgtcgac
gcgatcgatcctgcgctgcgccgtggcggccgcttcgaccgcgagatcgagatcggcgtg
cccgacaaggaagggcgcaaggagatcctgcaggttcacacgcgcgggatgccgctggcc
gacggtatcgatctcgacacctacgccgagagtacccacgggttcgtcggctcggacatc
gaaagcctcgccaaggagtcggcgatgaacgcactgcgccggatccggcccgagctcgat
ctcgacgaggaggagatcgacgccgaagtgctcgaatcgctgcaggtcactcgcgacgac
ctcaagagcgcactcaagggcatcgagccgagcgcgctccgcgaggtcttcgtcgaagtc
cctgatgtgacgtgggagagcgtcggcggtctcgacgacaccaaagagcgcctccgcgaa
accgtccagtggccgctcgactaccccgaggtgttcgaggcgatggacatgaacgccgcc
aagggcgtgatgatgtacggcccgccgggcaccgggaaaaccctcctggcgaaggccatc
gccaacgaggcccagtcgaacttcatctcgatcaaggggcccgagctgctcaacaagttc
gtcggcgagtcggagaagggcgtccgtgaagtgttctccaaggcacgcgagaacgctccc
acggtgatcttcttcgacgagatcgacgcgatcgccggcgagcgcggccgcaacatgggc
gactccggtgtgggcgaacgcgtcgtctcccagctcctcacggagctcgacgggctcgaa
gagctggaggacgtcgtggtgatcgccacctccaacagacccgacctcatcgacagcgca
ctcctgcgcccgggtcggctcgacagacacgtccacgttccggtgcccgacgaggacgcc
cgcgaggcgatcttcgaggtccacacgcgcgacaaaccgctcgccgacgacgtggatctc
gccgacctcgcccggcggacggagggctacgtcggcgcggatatcgaagccgtcacccgc
gaggccgcgatggccgcgacccgcgagctcatccagactgtggatcccgaggatctcgac
ggcagcgtcggcaacgtccgcatcgaggacgagcacttcgatcaggcgctcgacgacgtc
accccgagcgtcaccgccgagaccaaggagcgctacgaggagatcgaggaccgcttcgac
agcggcgaacccgccaccgaggagcgcgaggtcggtcgcaccttccagtag
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