KEGG   Halococcus dombrowskii: MUK72_15420
Entry
MUK72_15420       CDS       T08074                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
hdo  Halococcus dombrowskii
Pathway
hdo03030  DNA replication
hdo03410  Base excision repair
hdo03420  Nucleotide excision repair
hdo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hdo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MUK72_15420
   03410 Base excision repair
    MUK72_15420
   03420 Nucleotide excision repair
    MUK72_15420
   03430 Mismatch repair
    MUK72_15420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hdo03032]
    MUK72_15420
   03400 DNA repair and recombination proteins [BR:hdo03400]
    MUK72_15420
DNA replication proteins [BR:hdo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MUK72_15420
DNA repair and recombination proteins [BR:hdo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MUK72_15420
   MMR (mismatch excision repair)
    Other MMR factors
     MUK72_15420
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MUK72_15420
SSDB
Motif
Pfam: PCNA_C PCNA_N Orthopox_F6
Other DBs
NCBI-ProteinID: UOO96891
UniProt: A0AAX3AS37
LinkDB
Position
unnamed1:229575..230306
AA seq 243 aa
MEVGHLQEVIDAAHAIVDECRIHLDTDELVIRAVDPANVAMIDENVSADAFEAYDTDCGE
IGINLERLDEVVGIADNNDDLVQFDLDPKTRKLDVQVNAVEYTLALIDPESIRAEPDIPD
LDLPATVSMDEAEFKRAIRAADMVSDHITLQVDEREECFIANAEGDTDDVDLELSGDDLE
DADWGSAYSLFSLEYLKDLRKPIPSDTVVRMQLGEEFPIKLTFELADGAVDVEFMVAPRI
QSD
NT seq 732 nt   +upstreamnt  +downstreamnt
atcgaagtcggccacctccaggaggtcatcgacgcagcgcacgcaatcgtcgatgagtgt
cgcatccacctcgatacggatgagctcgtcattcgtgcggtcgatccggccaacgtggcg
atgatcgatgagaacgtgtccgctgatgcgttcgaagcctacgacacggactgtggcgag
atcggtatcaatctcgaacggttggacgaggtggtcggtatcgctgacaacaatgacgac
ctcgtacagttcgatctcgatccgaaaacccggaaactagacgtgcaggtcaacgctgtc
gaatacacgctcgcgttgatcgatcccgagtcgatccgagcagagcccgatattccggac
ctggacttgcccgccacagtctcgatggatgaagccgagttcaagcgagcgattcgggct
gcggatatggtctccgaccacatcaccctccaggttgacgagcgcgaggagtgcttcatc
gccaatgccgagggcgataccgacgatgtcgatctcgaactctccggcgacgatctcgaa
gacgccgactgggggagtgcgtattcactgttcagtctggagtatctgaaggatctccgc
aagccaattccgtcggatactgtcgttcggatgcagctcggtgaagagttcccgatcaaa
ctcaccttcgagttggctgatggggcggtggatgtcgaattcatggtcgcaccgcgaatc
caaagcgactga

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