Halococcus dombrowskii: MUK72_15635
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Entry
MUK72_15635 CDS
T08074
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hdo
Halococcus dombrowskii
Pathway
hdo03022
Basal transcription factors
hdo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hdo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MUK72_15635
09124 Replication and repair
03420 Nucleotide excision repair
MUK72_15635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdo03021
]
MUK72_15635
03036 Chromosome and associated proteins [BR:
hdo03036
]
MUK72_15635
03400 DNA repair and recombination proteins [BR:
hdo03400
]
MUK72_15635
Enzymes [BR:
hdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MUK72_15635
Transcription machinery [BR:
hdo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MUK72_15635
Chromosome and associated proteins [BR:
hdo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MUK72_15635
DNA repair and recombination proteins [BR:
hdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MUK72_15635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
UOO96626
UniProt:
A0AAV3SCX8
LinkDB
All DBs
Position
unnamed1:261013..263454
Genome browser
AA seq
813 aa
AA seq
DB search
MSSQDQTDQDGDEATIVHETIDRPELSPGSPATDWETYFPFDEPYDAQREAIEQTHETLL
DGGFAVAELACGTGKTLFSLMRGIELVRDPTTPYKRVMALTSVKQQIRAFEDDLKAINRN
LDEDIPPVSALTAVGKADLCSYVDTGRIDDNRIYSRCEELREPVRKTLAQTGSEDARTFL
DSLVDKSEVDSKSREQPVTTEDWSAPYAEGIPETDGGGSGGAEFCPFYAKYRRETLDDPE
EGGYTPQGVMTPEELRAQASTAGICPHAVMGDAVANAEVIIANYYHAFDPDTVDTLTGGI
IDKETLLICDEAHMLVPRVRDVLSQSLSRWQLQRTIDEIESEILNQSHRGVDRTIRETLT
EHFVSLDNLKKFVELLRDLQDELERRAATALDESDDVADWREKSHPDLPEDIQQPLRDPR
TPQPDDLSEWAADEGYTDLLGHAKQLCDGVVAALRQASQHHQGYTRLNTYSETTGQVLQR
WADCDHEQYIRTIELHKRQRAEEREFAWAGHYSAHLTIENCLPAEEIAAQLDHFGGGILM
SATLAPLDVYRRTVGLDRLEENGRPVQEIVAGLPFPPENRGSFAVDLEKFTYGNRGPTNP
RWRDDDQDDVRDDYASVIRDVARTTDGNVLVAMPSYSEGEWAAEMLRSDPQIEKEVLVDQ
SSSNEITESLKDEFFGGAPKALVTSLRGTLTEGVDYEGDRLDACVVCGVPITNIDGPVPT
AIRTAYEREFGKHNGFDFAFTVPAVRKARQALGRVIRGADETGIRVAADRRYASSHNWDD
VREYLPEYEQSDYDPTRPEMVTNEINRLVQQWK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgagctcacaagaccagacggatcaggatggcgacgaagcaacaatcgtccacgagaca
atcgaccggccagagctatcgccgggcagtcccgcaaccgactgggaaacgtacttcccg
ttcgacgaaccgtacgacgcccagcgcgaagcaatcgaacagacacacgagacgctcctt
gacggcgggttcgcggtcgccgaactcgcttgtgggactgggaagacgctgttctcgctc
atgcgaggcatcgaactcgttcgcgacccgacgacgccctacaagcgcgtcatggcgctg
acatcggtcaaacagcagatcagggcgtttgaggacgatctgaaggcgatcaaccgcaat
ctcgatgaggatattccaccggtatccgcgctcacagccgtcgggaaagcagacctgtgc
agctacgtcgataccggccggatcgacgacaaccgtatctactcgcggtgcgaggaactc
cgcgaaccggttcgaaagacgctcgcacagactggctccgaagacgcccgcaccttcctc
gattcgctggtagacaaaagcgaggtggattcgaagagtcgcgagcaacccgttaccacc
gaagactggagcgccccctacgcagaggggattcctgaaaccgatggtggagggagtggt
ggtgccgagttctgcccgttctatgcgaaataccggcgcgaaacgctcgatgatcccgaa
gaaggaggatacacgccgcagggcgtcatgacgccggaagagctgcgagcgcaagctagc
acggcgggaatctgtccgcacgcggtcatgggcgacgctgttgcgaacgccgaagtcatc
atcgccaactactatcatgcgttcgacccagatacagtcgatacgcttaccggcgggatc
atcgacaaggaaacactgctcatctgcgatgaagcacacatgctcgtgccgcgagtgcgc
gacgtgttgagtcagagtctgagtcgatggcagctccagcgaacgatcgatgaaatcgaa
tcagagatccttaaccagtcccatcggggcgtcgaccgcacgatccgggaaacgctcacc
gagcatttcgtctctctcgacaacctcaaaaagttcgtcgagctcctgcgtgacctccaa
gacgaactcgaacggcgtgcagccacagcgctcgacgagagcgacgacgtcgccgattgg
cgagaaaagagccaccctgacctgcccgaggatatccagcaaccgctacgcgacccacgg
actccacagcccgacgacctctcggagtgggccgccgacgaagggtatacggacttactc
ggccacgccaagcagctctgcgatggcgtcgtcgcagcactccggcaggcaagccagcac
catcagggctacacgcgactcaacacctactctgaaaccaccggacaggtccttcaacgc
tgggcggactgcgaccacgaacagtacattcggaccatcgagttgcacaaacgccagcga
gccgaagagcgcgagtttgcatgggccggccactactcggcgcacctgacgattgaaaac
tgcctcccggccgaggagatcgccgctcagctcgaccatttcggtggcggtatcctgatg
agcgcaacgctcgcaccactcgatgtctatcggcgaacggtcggtctcgaccgcctcgaa
gagaacggtcggcccgtccaagagatcgtagccggactgccgttcccgccggagaaccgt
gggtcgtttgccgtcgatctcgagaaattcacctatgggaatcgcggtcccacgaatcca
cgctggcgcgacgacgaccaggacgacgttcgcgacgactacgcgagtgtgatccgcgat
gtggcacgaacgactgatgggaacgtcctcgtcgccatgccgtcatactcggagggcgag
tgggccgcagagatgcttcgaagcgatccacagatcgaaaaggaagttctcgttgaccag
agttcgagtaacgagataacggaatcgctgaaagacgagttcttcggcggtgctccaaaa
gccctcgtgacctcactacgcggaacgcttaccgaaggtgtcgattacgagggcgaccgt
ctcgatgcctgtgtggtctgtggcgtgccgatcacgaatatcgatggtccagtgccgacc
gcgatcagaaccgcctacgagcgtgagttcggcaagcacaacgggttcgatttcgcattc
acggtaccagctgtgcggaaggcacgacaggcgcttgggcgggtgatccggggtgccgac
gaaacgggcattcgagttgccgctgaccgtcggtatgcgtcatcgcataactgggatgac
gttcgagagtatcttccggagtatgaacagagtgattacgatccaacgcgaccggagatg
gtcaccaacgagatcaaccgcctcgttcaacagtggaaatga
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