Halococcus dombrowskii: MUK72_16365
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Entry
MUK72_16365 CDS
T08074
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hdo
Halococcus dombrowskii
Pathway
hdo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MUK72_16365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hdo03019
]
MUK72_16365
03009 Ribosome biogenesis [BR:
hdo03009
]
MUK72_16365
04131 Membrane trafficking [BR:
hdo04131
]
MUK72_16365
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hdo04147
]
MUK72_16365
Messenger RNA biogenesis [BR:
hdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MUK72_16365
Ribosome biogenesis [BR:
hdo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MUK72_16365
Membrane trafficking [BR:
hdo04131
]
SNARE
SNARE associated proteins
Others
MUK72_16365
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MUK72_16365
Exosome [BR:
hdo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MUK72_16365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
CDC48_N
RuvB_N
AAA_22
CDC48_2
TIP49
AAA_14
AAA_33
AAA_5
AAA_2
AAA_lid_PRS2_C
nSTAND3
NPHP3_N
DUF815
RNA_helicase
AAA_7
ABC_tran
AAA_18
AAA_3
Mg_chelatase
AAA_28
TsaE
nSTAND_NTPase5
AAA_30
NB-ARC
IstB_IS21
Sigma54_activat
NACHT
AAA_11
Zeta_toxin
Parvo_NS1
PhoH
Motif
Other DBs
NCBI-ProteinID:
UOO97018
UniProt:
A0AAV3SJS6
LinkDB
All DBs
Position
unnamed2:23755..25932
Genome browser
AA seq
725 aa
AA seq
DB search
MELTVKPIVIPDADSEIAVVDREAMSELNLEDDDYARVNGHDDSAVVRIRPGPAEEAGRT
IIRLDGALRQTVGVGIDDTVTIEMADVESAERVTIALPVESTVSDTPGLYVRDYLTDRVV
TDGQTLPIAPGFESVSGGTAQRIPVKVIETQPSGTVAIQEWTDVMVSEEAVEGPVITTED
ALAVTYEDIGGLDDELAQVREMVELPMRYPELFRKLNIDPPRGLLLHGLPGTGKTLVTKA
ISSEVDAFFATISGPELTSTQYGETEERLREIFKEAEANAPSVVFIDDVDAIVPKREDAN
DVERRIVAQLLGLLDGLAERGQVIVIGTTNRLDVIDPALRRPGRFDRELEIGVPDGEGRK
EILSIHTRGMPLSDDIDLDTYAENTHGFVGADIENLVKESAMCAIRRVRPEFDSSSEVVD
TELLDSLFVTDADVKEALTGIEPSALREVFVEVPDVSWEDVGGLETTKERLRETIQWPLA
YPNAFERVDLRPAKGVLLHGPPGTGKTLLAKAVANEAQSNFISIKGPELLDKYVGESEKG
VREVFAKARENAPTVIFFDEIDAMAGERGEGTGDAGVGERVVSQLLTELDGLEDLENVVV
VAATNRPDLIDDALVRPGRLDRHMHVSTPDKEARREIFDVHTREKPLADDVDLADLSERT
EGYVGADIEAVCREASTAAVREYVRSTNEGTAADVATIDLTLDHFERALSEVESTRVGGS
DAQFG
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaccgtcaaaccgattgtgatccccgacgcggacagtgagatagcggtggtc
gaccgcgaagcgatgagtgaactgaatctcgaagacgatgactacgctcgggtcaacgga
cacgatgacagcgcagtcgtacggattcgtcccggcccggcagaagaagcgggccgtacg
atcatccgcctcgatggtgcgctccggcaaacagtcggcgtcggcatcgacgacaccgtg
actatcgagatggccgacgtcgaatccgcagaacgagtaacgattgctctaccggtggag
tccactgtgtccgacacccccggtctgtacgtccgagactatctcaccgaccgggtcgtc
accgacgggcagacgcttccgattgcgcccggatttgagtcagtctcgggtgggacggcc
caacgcattcctgtgaaagtcatcgaaacgcagccatctgggacagtcgccatacaggaa
tggaccgacgtcatggtttcggaggaagccgtcgagggacccgtgatcaccactgaggat
gcgctcgccgttacttacgaggacatcggggggctggacgacgaacttgcccaagtgaga
gagatggtcgaactcccgatgcgctatcccgaactgtttcggaagttgaatatcgacccg
ccgagagggctgctcttgcatgggctgccaggcacgggaaaaacgctcgtcacgaaggct
atctcgagcgaggtcgatgcgtttttcgcgacgatttccggcccggaactcacctcgacg
cagtacggagagaccgaagaacgactcagggaaattttcaaggaggcggaagcgaacgca
ccctcggtggtcttcattgacgatgtagacgccatcgtacccaaacgcgaggacgcaaac
gatgtcgaacgtcgtatcgtcgcccaactcctcgggttgcttgacggcttagcggagcgg
gggcaggtcatcgtcatcggtaccacgaatcggctagacgtcattgaccccgcgctccgc
cggcccggacggttcgatagggaactcgaaatcggcgtcccggatggcgagggaagaaag
gaaatcctgtcgatacacacccgtggcatgccactctcagatgatatcgacctcgacacc
tacgccgagaacacgcatggattcgtgggagccgacatcgaaaacctcgtgaaagagagc
gcgatgtgtgcgattcggcgggttcgccccgaattcgattccagctcagaggtagtcgat
accgaactactcgactcgcttttcgtaaccgacgccgatgtcaaggaggcactgacgggc
atcgaaccgtcggcactccgagaggtgttcgtggaggttcccgacgtgtcgtgggaggac
gtgggcggtctcgaaaccaccaaagaacgtctccgagagaccatccagtggccgctcgct
tatcccaatgcgttcgagcgcgtggacctgcgtcccgcgaagggcgttctccttcacggg
ccgcccggcacggggaagaccttgctggcgaaggcagtcgccaacgaagcccagtcgaac
tttatctccatcaagggacccgaactcctcgacaaatacgtcggcgaaagtgaaaaaggc
gtccgcgaggtgtttgcgaaagccagagagaacgctcccactgtcatcttcttcgacgaa
atcgacgcgatggcgggcgagcgtggtgagggaacgggcgacgccggagtgggcgaacgg
gtcgtctcacagttattgacggaactcgatggattagaagacttagagaatgtcgttgtg
gttgcggcgacgaatcgcccggacctcatcgacgatgcgctggttcggccgggacgactc
gatagacacatgcacgtctccaccccagacaaggaggccagacgtgagatattcgatgtt
cacacccgagagaagccgcttgccgacgacgttgacctcgcggatctctcggaacgaact
gaggggtacgtcggtgcggacatcgaagcggtgtgtcgtgaggcttcgacggccgcagtg
agagagtacgttcgctccacgaatgagggaacagcagccgacgtggcgaccatcgacctc
acactggaccacttcgagcgcgcactttcggaagtcgaatccactagagtcggcggcagt
gatgctcagttcggctga
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