Haloferax denitrificans: ACOZ39_01075
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Entry
ACOZ39_01075 CDS
T12020
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
hdr Haloferax denitrificans
Brite
KEGG Orthology (KO) [BR:
hdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hdr03009
]
ACOZ39_01075
Ribosome biogenesis [BR:
hdr03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
ACOZ39_01075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
AAA_23
AAA_16
AAA_22
AAA
AAA_29
NB-ARC
Fer4
Rad17
Fer4_6
Fer4_7
nSTAND_NTPase5
LdpA_Fe-S-bd
Fer4_10
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
XRI15634
LinkDB
All DBs
Position
200105..201919
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AA seq
604 aa
AA seq
DB search
MADDSIAVVDLDRCSPDRCSYECSNFCPPNRTGKECITLRGEDAEQGGPDQVRISEEICL
GETCGICVEKCPFDAIEIINLPSELDEDPTHRYGENAFSLYGLPVPESGAVTGILGPNGI
GKTTAVRALAGEMVPNLGNYDDDPTWEAVLDRFRGTELQNYVERVRDGEVSIARKPQYVD
QIPKQFDGTARDLLEATDERGALDSYIDRLDIGPVVDNDIETLSGGELQRVALAATLARD
RDFYFLDEISPYLDIGQRVTAARLIRELAEDEDRAVLVVEHDLAILDLLADTLHVAYGEP
GAYGVITDPKSVRNGINEYLKGYLSNENMRIRPEAITFEEHAPRETTKAEPLVEYPDLAK
SYGDGEFSLDVESGTIYNGEVLGIVGPNGIGKSTLAQLFTGDLTPDMGDLDFALDISYKP
QYIEIDQPMRVDAFLSSITDQFGSSYWNTEIANPLQLNRIMERNLTDLSGGERQRVAIAA
CLSQDADLYLLDEPSAHLDVEQRVQATSAIRRYAENHDATVMVIDHDIYMMDLLADRLMV
FDGEPSIEGHASKPQEMRDGMNDFLSDLDITFRRDERTQRPRINKPDSQLDREQKRAGEY
YYAE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatagtatcgccgtcgtcgacttagaccggtgttctcccgaccgctgtagc
tacgagtgctcgaacttctgtccgccgaaccggacgggcaaagagtgcatcacgctccgc
ggcgaggacgccgagcagggcggtcccgaccaggtgcgcatctccgaggaaatctgcctc
ggcgagacctgcggcatctgcgtcgagaagtgccccttcgacgcaatcgaaatcatcaac
ctcccctcggaactcgacgaggaccccacccaccgctacggcgaaaacgccttctcgctg
tacgggcttccggtccccgagtccggcgcggtgacggggattctcggcccgaacggtatc
gggaagacgaccgccgtccgcgccctcgcgggcgagatggtccccaacctcggcaactac
gacgacgacccgacgtgggaggccgtcctcgaccgcttccgcggcaccgagctccagaac
tacgtcgagcgggtccgcgacggtgaggtctccatcgcgcgcaagccgcagtacgtcgac
cagattcccaagcagttcgacgggacggcgcgcgacctcctcgaagcgaccgacgagcgc
ggcgcgctcgactcctacatcgaccgcctcgacatcggtcccgtcgtcgacaacgacatc
gagacgctctccggcggcgagcttcagcgggtcgccctcgcggcgacgctcgcccgcgac
cgcgacttctacttcctcgacgagatttcgccgtacctcgacatcggccagcgcgtcacc
gccgcgcggctcatccgcgagctcgcggaggacgaagaccgcgcggtgctcgtggtcgaa
cacgacctcgccatcctcgacctgctcgccgacacgctccacgtcgcctacggtgagccg
ggggcgtacggtgtcatcaccgacccaaagtcggtcagaaacggcatcaacgagtacctg
aagggctacctctcgaacgagaacatgcgcatccgcccggaggccatcaccttcgaggaa
cacgccccgcgggagacgacgaaggccgaacccctcgtcgagtaccccgacctcgccaag
tcctacggcgacggcgagttctcgctcgacgtggagtccggcaccatctacaacggcgaa
gtgctcggcatagtcggccccaacggtatcgggaagtccacgctcgcccagctctttacg
ggcgacctgacgcccgatatgggcgacctcgacttcgcgctcgacatctcgtacaagccg
cagtacatcgaaatcgaccagccgatgcgggtcgacgcgttcctctcgtctatcaccgac
cagttcggctcgtcgtactggaacaccgaaatcgcgaacccgctccagctcaaccgcatc
atggagcgcaacctcaccgacctctccggcggcgagcgccagcgcgtcgccatcgcggcg
tgtctctcgcaggacgccgacctctacctgctcgacgagccgtcggcccacctcgacgtc
gaacagcgcgtgcaggccacctcggccatccgccgctacgccgagaaccacgacgcgacg
gtcatggtcatcgaccacgacatctacatgatggacctgctcgcggaccgcctgatggtg
ttcgacggcgagccgtccatcgagggccacgcctcgaagccgcaggagatgcgcgacggc
atgaacgacttcctgtcggacctcgacatcacgttccgccgcgacgagcgcacccagcgc
ccgcgcatcaacaagcccgactcgcaactcgaccgcgagcagaagcgcgccggcgagtac
tactacgccgagtag
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