Haloferax denitrificans: ACOZ39_10605
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Entry
ACOZ39_10605 CDS
T12020
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hdr Haloferax denitrificans
Pathway
hdr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hdr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
ACOZ39_10605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hdr03019
]
ACOZ39_10605
03009 Ribosome biogenesis [BR:
hdr03009
]
ACOZ39_10605
04131 Membrane trafficking [BR:
hdr04131
]
ACOZ39_10605
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hdr04147
]
ACOZ39_10605
Messenger RNA biogenesis [BR:
hdr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
ACOZ39_10605
Ribosome biogenesis [BR:
hdr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
ACOZ39_10605
Membrane trafficking [BR:
hdr04131
]
SNARE
SNARE associated proteins
Others
ACOZ39_10605
Autophagy
Aggrephagy
Other aggrephagy associated proteins
ACOZ39_10605
Exosome [BR:
hdr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ACOZ39_10605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
AAA_16
AAA_5
RuvB_N
TIP49
AAA_22
AAA_33
nSTAND3
AAA_2
AAA_14
NPHP3_N
AAA_28
IstB_IS21
RNA_helicase
AAA_7
Sigma54_activat
Mg_chelatase
nSTAND_NTPase5
AAA_17
AAA_18
ABC_tran
NB-ARC
AAA_lid_PRS2_C
DUF815
ATPase
AAA_3
Zeta_toxin
Parvo_NS1
TsaE
AAA_11
PhoH
SLFN-g3_helicase
AAA_19
AAA_24
bpMoxR
NACHT
Vps4_C
Zot
DUF6985
Motif
Other DBs
NCBI-ProteinID:
XRI14588
LinkDB
All DBs
Position
1987663..1989894
Genome browser
AA seq
743 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGGKTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEATKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETKPDGVVLVTEDTDVELREEPISGFE
KAGGGITYEDIGGLTNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
RAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEE
GRKEILQIHTRGMPLSDDVDLDDLADDTHGFVGADIEALTKEAAMKALRRYLPEIDLDRE
DIPPSLIDRMVVKNDDFGGALGEVEPSAMREVLVEIPKVTWEDVGGLEGPKQKVQESVEW
PLTTPEKFERMGIEAPKGVLLYGPPGTGKTLIAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTIIFFDELDALAPARGNDMGNNVSERVVNQLLTELDGLEDAGNV
MVIAATNRPDMIDPALIRSGRFDRLVLIGQPAEEGREQILDIHTQQSPLAPDVSLREIAE
ITDGYVGSDLESICREAAIEALREDSDAEEIEMRHFRKAMESVRPTITEELMRYYEDIQD
QFKGGAREGLSPDTRDGGRIGFQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtccaactcgaagtggcgaaagcgtacccgaacgactcggggcgcggcatc
gcccgtcttgatccggacaccttgctccatctcaagctctcgccgggagacatcatcgag
atagagggaggaaaaacgaccgccgcgaaggtgtggcgggcagaccggcaggactggaac
acggatacggtccgcatcgacgggttcacgcggcagaacgccgacgtgggcatcggagag
cgggtcaccatccgcaaggcagaggccacgaaggccgacaaactcgtgcttgcgccgccg
gaggaggcgagcgtgcagttcgggtccgacgcggccggcatggtcaaacggcagattctc
aagcggcccgtggtcgaacgcgacatcgtcccggtgatgtcgagcacgaaccacccgttt
atgcggtcgcccggacaggcgattccgctcatcgccgtcgagacgaagcccgacggcgtc
gtcctcgtcaccgaggacaccgacgtcgagctccgcgaggagcccatctcgggcttcgag
aaggccggcggcggcatcacctacgaggacatcggcggcctgaccaacgagattcagcgc
gtccgcgagatggtcgaactgccgatgaaacacccccagatattcaagaaactgggcatc
gagcccccgcagggggtgttgctccacgggccgccgggcacggggaagacgcttctcgcc
cgcgcggtcgccaacgagacctccgcgagtttcttctctatcgcagggccggaaatcatc
tcgaagtactacggcgagtccgaacaacagctccgcgagatattcgaggacgccaaagag
gagtcgccgagcatcatcttcatcgacgagctcgactccatcgcgcccaagcgcgaggac
gtgaccggcgaggtcgaacgccgggtcgtcgcccaactcttgacgatgatggacgggctc
gaagcccgcggtcaggtcatcgtcatcgcggcgacgaaccgcgtcgactcggtggacccc
gcgctccgccggcccggtcggttcgaccgcgaaatcgaaatcggcgtgcctgacgaggag
ggccgcaaggaaatcctccagattcacacccgcggcatgccgctttcggacgacgtggac
ctcgacgacctcgccgacgacacccacggcttcgtcggtgcggacatcgaggcgctgacc
aaggaggccgcgatgaaggcgctccggcgctacctccccgaaatcgacctcgacagggag
gacatcccgccgagcctcatcgaccgcatggtcgtcaagaacgacgacttcggcggcgcg
ctcggcgaggtcgaaccctcggcgatgcgcgaggtgctcgtcgagattccgaaggtcacg
tgggaggacgtgggcggtctcgaagggcccaaacagaaggtccaagagagcgtcgagtgg
ccgctgacgacccccgagaagttcgagcggatgggcatcgaggccccgaagggcgtgctc
ctctacgggccgcccggcacgggcaagaccctgatagcgaaggccgtcgccaacgagacg
aacgcgaacttcatctcggtgcgcggcccgcaactgctgtcgaagtgggtcggcgagtcc
gagaaggcgattcggcagacgttccgcaaggcgcgacaggtctcgccgaccatcatcttc
ttcgacgagctcgacgcgctcgccccggcccgcggcaacgacatgggcaacaacgtctcc
gagcgcgtcgtcaaccagctcctgacggagttagacggcctcgaagacgcgggcaacgtc
atggtcatcgcggcgaccaaccgcccggacatgatcgaccccgcgctcatccgctcgggc
cggttcgaccgcctcgtgctcatcggccagcccgcagaggagggccgcgagcagattctc
gacatccacacccagcagagcccgctcgcccccgacgtgagcctccgcgaaatcgcggag
ataaccgacggctacgtcggctccgacctcgaatccatctgccgcgaggcggccatcgag
gcgctccgcgaggactccgacgccgaggaaatcgagatgcgccacttccgcaaggcgatg
gagtcggtccgcccgaccatcaccgaggaactgatgcgctactacgaggacatccaagac
cagttcaaaggcggcgcccgcgaggggctgtcgcccgacacccgcgacggcggccgcatc
ggcttccagtaa
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integrated database retrieval system
