Halapricum desulfuricans: HSR122_0108
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Entry
HSR122_0108 CDS
T07709
Symbol
sen2
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hds
Halapricum desulfuricans
Brite
KEGG Orthology (KO) [BR:
hds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hds03016
]
HSR122_0108 (sen2)
Enzymes [BR:
hds01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HSR122_0108 (sen2)
Transfer RNA biogenesis [BR:
hds03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HSR122_0108 (sen2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QSG07530
UniProt:
A0A897MZM1
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All DBs
Position
99713..100708
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AA seq
331 aa
AA seq
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MELTLDGSTVRGGRQARERFHDARGYGRVVDGDLELAPVEAAHLLYRGDVETVRDAGSGD
RLDFRALLSSDVVSEIDVLVYKDLRDRGFYLSPTDEPNADFLVYPRGKGPWDDEIAHRIR
AISERTALSARTLGETVLAVVDEESSIAYLETGRPDVRGTTDADLPRGVPAELLDDRVFV
WEPPAVLYERGFYGQPLDDGGPLQLSLLEAAALARRGVLALPADEIVERGRTVEGERFDR
RLAVYRALRDRNVVPKTGYKFGADFRTYADIEHVEELGHSELLVRVLPADHAFAPRDLAL
DVRLAHGVRKRMVFALAGETIEWLSVSRLTP
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggaactcacgctcgacggatcgaccgttcgcggcggtcggcaggcacgcgagcggttt
cacgacgctcgcgggtacgggcgcgtcgtcgacggcgatctggaactggctcccgtcgaa
gccgcgcacctcctctatcgcggcgacgtcgagacggtccgggacgccggttcgggtgac
cggctggacttccgagcgctgctatcctcggacgtcgtctcggagatcgacgtgctcgtc
tacaaggacctgcgcgatcgcggcttctacctctcaccgaccgacgagccgaacgccgac
ttcctcgtctatccccggggcaagggcccgtgggacgacgagatcgcccaccgtattcgg
gcgattagcgagcggactgcgctgtcggcccgcacgctcggggagacggtcctcgccgtc
gtcgacgaggagtcctcgatcgcgtatctcgaaaccggccgtcccgacgttcgaggaacg
accgacgctgacctcccgcgcggggtcccggccgaactgctcgacgaccgcgtgttcgtc
tgggagccgccggcggtcctgtacgagcgcggcttctacggacagccgctggacgacggc
gggccactgcaactgtcgctgctcgaagccgccgcgctcgctcgccgtggcgtgctggcg
cttccggcagacgagatcgtcgagcgcggccggacagtcgagggagagcgcttcgaccga
cggctggcggtctaccgtgcgcttcgcgaccggaacgtagtgcccaagaccggctacaag
ttcggtgccgacttccggacctatgccgacatcgagcacgtcgaggaactcggccactcc
gagctgctcgttcgcgtcctcccggccgatcacgccttcgctccgcgggacctcgcgctc
gacgtccggctggctcacggcgtccgcaagcgaatggtgttcgcgctcgccggcgagacg
atcgagtggctgtcggtctcccggcttacgccgtga
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