Halapricum desulfuricans: HSR122_0973
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Entry
HSR122_0973 CDS
T07709
Symbol
fen1
Name
(GenBank) 5'-3' exonuclease
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
hds
Halapricum desulfuricans
Pathway
hds03030
DNA replication
hds03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HSR122_0973 (fen1)
03410 Base excision repair
HSR122_0973 (fen1)
03450 Non-homologous end-joining
HSR122_0973 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hds03032
]
HSR122_0973 (fen1)
03400 DNA repair and recombination proteins [BR:
hds03400
]
HSR122_0973 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hds04147
]
HSR122_0973 (fen1)
DNA replication proteins [BR:
hds03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
HSR122_0973 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
HSR122_0973 (fen1)
DNA repair and recombination proteins [BR:
hds03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
HSR122_0973 (fen1)
Exosome [BR:
hds04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HSR122_0973 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QSG08376
UniProt:
A0A897ND98
LinkDB
All DBs
Position
complement(915080..916060)
Genome browser
AA seq
326 aa
AA seq
DB search
MGNAALRELAVLEDVPFADLQGSVVAVDAHNWLYRYLTTTVKWTSDEVYTTSDGEEVANL
VGVVQGLPKFFEHDLTPVFVFDGAVTDLKDDEVQQRREQREAAQQRLETAREEGDEIAVA
RLESRTQRLTETIVETTRELLELLDVPIVDAPAEGEAQAAVMARRGDVDYVGTEDYDALL
FGAPLTLRQLTSKGDPELMDLDATLEAHDISWEQLIDVAILCGTDFNEGVSGYGPKTSVK
AIKEHGDLWGVIEADGLHVENADRIRQLFRDPPVTETPDLDLDVSPDVDAAREYVTGTWE
VDPEEVERGFERIEQSQVQTGLDQWS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgcagcgctgcgcgaactggcggtcctcgaggacgtcccgttcgccgacctg
caggggtcggtcgtcgccgtggacgcccacaactggctgtaccggtacctgacgacgaca
gtcaagtggaccagcgatgaggtctacacgaccagcgacggcgaagaagtcgccaacctc
gtcggcgtcgtccagggactgccgaagttcttcgaacacgatctgacgcccgtattcgtc
ttcgacggcgcagtcaccgacctgaaagacgacgaagtacagcagcgacgcgagcaacgc
gaggccgcccaacagcgcctcgaaaccgcccgcgaggaaggcgacgagatcgccgtcgca
cggctggagagccgcacccagcgactgaccgagacgatcgtcgagacgacccgcgagctg
ctcgaactgctggacgtgccgatcgtcgacgcgccggccgagggcgaggcacaggcggcg
gtgatggcccgccgcggcgacgtcgattacgtcggcaccgaggactacgacgcgctgctg
ttcggcgcaccgctgacgctccggcagttgaccagcaagggcgatccggaactgatggat
ctggacgcgacgctcgaagcgcacgacatctcctgggagcagttgatcgacgtcgcgatc
ctctgcgggacggatttcaacgagggcgtgtccggatacgggccgaaaacgtccgtcaaa
gccatcaaagagcacggcgacctgtggggcgtcatcgaggccgacggactccacgtcgag
aacgccgaccggatcagacagctctttcgcgatccgccggtcaccgagacgccggacctc
gatctcgacgtctcgccggacgtggacgcggcccgcgagtacgtcaccgggacctgggag
gtcgatcccgaggaggtcgagcgcgggttcgagcggatcgagcaatcgcaagtccaaacc
ggcctcgaccagtggtcgtga
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integrated database retrieval system
