Halapricum desulfuricans: HSR122_1228
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Entry
HSR122_1228 CDS
T07709
Symbol
truD
Name
(GenBank) tRNA(Glu) U13 pseudouridine synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hds
Halapricum desulfuricans
Brite
KEGG Orthology (KO) [BR:
hds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hds03016
]
HSR122_1228 (truD)
Enzymes [BR:
hds01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HSR122_1228 (truD)
Transfer RNA biogenesis [BR:
hds03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HSR122_1228 (truD)
Prokaryotic type
HSR122_1228 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QSG08626
UniProt:
A0A897NE14
LinkDB
All DBs
Position
complement(1138163..1139500)
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AA seq
445 aa
AA seq
DB search
MREAHPLEAAVGIDYYVSDAAGIGGRLRESPEHFRVEEIETVDPEPLSADPGAYPHVLLR
ATLREWDTNDFAGALSDRLGISRERIDWAGTKDKYAVTTQLFTVRKGDPDALAAVDLPET
DIEILGRTGRGLQFGDLAGNRFEITVTGANRTDTIESITDDLRSFGGDRVGVPNVFGQQR
FGSRRAITHEVGLAIVRREWEQAVRTYVGNPSERERERTRTARATVEDSWERREWQRALE
AMPAYLGYERAMLQRLAELDGDEPADFRSALTALPSNLQRLLVNAAQSYAFNRICSERLR
RGLPFDEPIEGDVICFADSDAPPDPALPDTSRTQSVTERRVETARRHVERGRAFVTAPLV
GTDTEFGAGEPAEIARDVLDDLELEPADFELPGEFESSGTRRAILVRTDLEVSGDPPTFS
FALPKGSYATVLLREYMKAPPDDLA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggcacacccactcgaggcggccgtcgggatcgactactacgtcagcgacgcg
gcggggatcggcggccgactccgcgagtcgcccgaacacttccgggtcgaggagatcgag
accgtcgatcccgagccgctgtcggccgatcccggcgcgtacccgcacgtgcttttgcgg
gctacgctgcgagagtgggataccaacgacttcgcgggcgcgctgtcggaccgactgggg
atcagccgcgagcggatcgactgggccggcacgaaggacaagtacgcggtcacgacgcag
ctgttcaccgtccggaagggcgatccggacgcgctcgcggccgtcgacctgccggagacg
gatatcgagatactgggccgaaccgggcgcggcctgcagttcggcgatctggcgggcaac
cgcttcgagatcacggtcacgggggccaaccggactgatacgatcgagtcgatcaccgac
gacctgcgatcgttcggcggcgaccgggtgggcgtgcccaacgtcttcggccagcagcgc
ttcggcagtcgccgcgcgatcacccacgaggtcggactggcgatcgtccgccgcgagtgg
gagcaggccgtccggacctacgtcggaaatcccagcgagcgcgaacgcgagcgaacccgg
acggcacgcgcgactgtcgaagacagctgggagcgtcgcgagtggcagcgggcgctcgag
gcgatgccggcgtacctgggctacgagcgggcgatgttgcagcgactcgccgaactcgac
ggcgacgagccggccgacttccggtcggcgctgaccgcgctgccgagcaacctccagcgc
ctgctggtcaacgccgcccagtcgtacgcgttcaaccggatctgctcggagcgactccgc
cgcggactgccgttcgacgaaccgatcgagggcgacgtgatctgcttcgccgacagcgac
gccccacctgatccggcgttgcccgatacgagtcggacacaatcggtcaccgagcgtcgc
gtcgagacggcgcgccgacacgtcgagcgcggccgggcgttcgtgaccgcgccgctggtc
ggaactgacaccgagttcggcgcgggcgagccggccgaaatcgcccgtgacgtgctcgac
gatctcgagctcgaaccggccgatttcgagctgcccggcgagttcgaatcgtcgggcacc
cggcgggcgatactggtgcggactgatctcgaggtgtcgggcgatccgccgacgttctcc
ttcgcgctcccgaaagggtcctacgcgaccgtcctgcttcgggagtacatgaaggccccg
cccgacgacctcgcgtga
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