Halapricum desulfuricans: HSR122_1716
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Entry
HSR122_1716 CDS
T07709
Symbol
sua76
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hds
Halapricum desulfuricans
Pathway
hds03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hds00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HSR122_1716 (sua76)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hds03021
]
HSR122_1716 (sua76)
Transcription machinery [BR:
hds03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HSR122_1716 (sua76)
Prokaryotic type
Archaeal type
TFB
HSR122_1716 (sua76)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Trm112p
Auto_anti-p27
Zn_ribbon_RRN7
A2L_zn_ribbon
DZR
zf-FPG_IleRS
Zn_ribbon_tTFIIB
HTH_24
Cyclin_N
GFA
DUF8054_C
DZR_2
Zn_ribbon_Nudix
UMPH-1
Zn_ribbon_Top1
DUF1272
Motif
Other DBs
NCBI-ProteinID:
QSG09107
UniProt:
A0A897N8U3
LinkDB
All DBs
Position
complement(1588406..1589428)
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AA seq
340 aa
AA seq
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MVPERRELALSTIIMSETTTRTTNSEYERTGERATEQSDEQEVCPECGGPLVTDEERGET
VCQHCGLVVEENEIDHGPEWRAFNAGEKDRKSRVGAPTTTMMHDKGLSTNIGWQNKDAYG
KSLSSSQREKMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYR
RALQEDLLPGRSIEGVATAALYAAARQASVPRSLDEMTTVSRVDKTELTRTYRYIVRELD
LEIKPAEPESYVPRFVSDLDLSDEVERTARRLIEAARADGVLSGKSPVGIAAAAIYAAAL
LSNERVTQSDVSEVADISEVTIRNRYKELLDAEGARNVPA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggtccccgaacgacgcgaactcgccctttcgacaatcatcatgagcgagacaacgaca
cgaaccaccaacagcgagtacgagcgaaccggcgagcgagcgacggaacagagcgacgag
caggaggtctgtccggagtgtggcggtccgctggtgaccgacgaggagcgcggcgagacg
gtctgtcaacactgcgggctggtcgtcgaagagaacgagatcgatcacgggccggagtgg
cgggcgttcaacgccggcgagaaggatcgcaagtcccgcgtcggcgcgccgacgacgacg
atgatgcacgacaagggactgtcgacgaacatcggctggcagaacaaggacgcctacggg
aagtccctctcctcgagccagcgcgagaagatgcaacggcttcgcacctggaacgagcgg
ttccggacccgcgactccaaggaacgcaacctcaagcaggccctcggcgagatcgatcgc
atggcctcggcgctgggcctgcccgagaacgtccgcgagaccgctagcgtcatctaccgc
cgggcgctgcaggaggacctgttgcccggtcgctcgatcgagggtgtcgcgacggccgca
ctgtacgccgccgcccggcaggcgagcgtcccccggtcgctcgacgagatgacgaccgtc
tcccgggtcgacaagacggaactaacccggacctaccgctacatcgtgcgcgaactggac
ctcgagatcaagcccgccgagcccgaaagttacgtgccccggttcgtctccgacctcgat
ctctccgacgaggtcgagcggaccgcccggcgactgatcgaggcggcccgagccgacggc
gtcctcagcgggaagagcccggtcgggatcgcggcagcagccatctacgccgcggcgctg
ctcagcaacgagcgagtcacccagagcgacgtcagcgaggtcgccgacatctccgaggtc
acgatccgcaaccggtacaaggagttgctggacgccgaaggcgctcggaacgtccccgcc
tga
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