Halapricum desulfuricans: HSR122_2038
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Entry
HSR122_2038 CDS
T07709
Symbol
sua77
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hds
Halapricum desulfuricans
Pathway
hds03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hds00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HSR122_2038 (sua77)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hds03021
]
HSR122_2038 (sua77)
Transcription machinery [BR:
hds03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HSR122_2038 (sua77)
Prokaryotic type
Archaeal type
TFB
HSR122_2038 (sua77)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Trm112p
Zn_ribbon_19
Anti-TRAP
Cas12f1-like_TNB
DUF5795
HTH_Tnp_ISL3
DUF7558
DZR
Zn_ribbon_RRN7
DUF8054_C
DUF1272
Auto_anti-p27
Zn_ribbon_LysW
DUF7560
DUF8106
Motif
Other DBs
NCBI-ProteinID:
QSG09423
UniProt:
A0A897NEG5
LinkDB
All DBs
Position
1886563..1887525
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AA seq
320 aa
AA seq
DB search
MSESTRTRARSTVESETDEQSDLTCPECGGNLVADDARGETVCDGCGLVVDADEIDRGPE
WRAFDSKEKDEKSRVGAPTTNMMHDKGLSTNIDWRDKDAYGNSLSSNQREKMQRLRKWNE
RFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIEGVSTS
AVYAAARQAGVPRSLDEITDVSRVGKDEIARTYRYVVRELGLEVKPADPESYVPRFASDL
DLSEEAEHRARELLINAKEQGVHSGKSPVGLAAAAVYAASLLTNEKTTQAAVSEVADISE
VTIRNRYHELLEAEQGIAMA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtcaacacgaacgcgagcacgatcgacagtagaatcggagaccgacgaacag
agcgacctgacctgcccggagtgtggcgggaacctcgtggccgacgacgcgcgcggcgag
accgtctgtgacggctgcggactggtcgtcgacgccgacgagatcgaccgcgggccggag
tggcgcgcgttcgattccaaggagaaagacgagaagtcccgcgtcggcgcgccgacgacg
aacatgatgcacgacaagggactgtcgacgaacatcgactggcgcgacaaggacgcctac
ggtaactcgctgtcctcgaaccagcgcgagaagatgcagcgcctgcgcaaatggaacgag
cgcttccggacccgcgactccaaggagcgcaatctcaagcaagcgctgggcgagatcgac
cgcatggcctcggcgctgggcctgcccgagaacgtccgcgagaccgccagcgtcatctac
cgacgcgcgctcgacgaggacctgttgcccggccgttcgatcgagggcgtctcgacctcc
gcggtctacgccgccgctcgacaggccggcgtgccccggtcgctcgacgagattaccgac
gtctcccgcgtcggaaaggacgagatcgcgcgcacgtaccggtacgtcgtccgcgagctc
gggctggaggtcaagcccgctgaccccgagagttacgtgccccgcttcgcctcggacctt
gatctctccgaagaggccgaacatcgcgcccgcgaactgctgatcaacgccaaagagcag
ggcgtccactccgggaaatcccccgtcggactggccgccgccgcggtctacgccgcctcg
cttctgaccaacgagaagaccacccaggccgccgtctcggaggtcgcagacatctccgaa
gtcacgatccgcaaccgatatcacgagctgctcgaggccgaacagggcatcgcgatggcc
tga
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