Halapricum desulfuricans: HSR122_2156
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Entry
HSR122_2156 CDS
T07709
Symbol
cdc484
Name
(GenBank) ATPase of the AAA+ class, CDC48 family
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hds
Halapricum desulfuricans
Pathway
hds04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HSR122_2156 (cdc484)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hds03019
]
HSR122_2156 (cdc484)
03009 Ribosome biogenesis [BR:
hds03009
]
HSR122_2156 (cdc484)
04131 Membrane trafficking [BR:
hds04131
]
HSR122_2156 (cdc484)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hds04147
]
HSR122_2156 (cdc484)
Messenger RNA biogenesis [BR:
hds03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HSR122_2156 (cdc484)
Ribosome biogenesis [BR:
hds03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HSR122_2156 (cdc484)
Membrane trafficking [BR:
hds04131
]
SNARE
SNARE associated proteins
Others
HSR122_2156 (cdc484)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HSR122_2156 (cdc484)
Exosome [BR:
hds04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HSR122_2156 (cdc484)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
AAA_16
RuvB_N
AAA_2
TIP49
AAA_5
AAA_22
AAA_33
AAA_14
NPHP3_N
nSTAND3
RNA_helicase
AAA_7
AAA_28
AAA_lid_PRS2_C
IstB_IS21
Mg_chelatase
DUF815
AAA_25
ABC_tran
AAA_18
TsaE
AAA_3
Parvo_NS1
AAA_11
AAA_17
Sigma54_activat
AAA_24
AAA_30
ATPase
NACHT
NB-ARC
AAA_19
SLFN-g3_helicase
PhoH
Zeta_toxin
bpMoxR
NTPase_1
ATPase_2
Bac_DnaA
ATP-synt_ab
Zot
Motif
Other DBs
NCBI-ProteinID:
QSG09540
UniProt:
A0A897N569
LinkDB
All DBs
Position
complement(1993998..1996268)
Genome browser
AA seq
756 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRVAMDELDLENGDYIVIEGRQSGRAVARVWPGYPEDSGE
GIVRIDGRLRQEANVGIDDTVEIEKADVKPARSITVALPQNLRVRGNIAPHVRNKLSGQA
VTQGQTVPFSLGLGPISNVGGQKIPLKIAETDPEGTVVVTDQTEIEISEQPAEQITGGPQ
QEERETPSVTYEDIGGLDEELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKT
LMAKAVANEIDAYFTTISGPEIMSKFYGESEEQLREVFDEAEENAPAIVFIDELDSIAPK
RGETSGDVERRVVAQLLSLMDGLEERGDVIVIGATNRVDAVDPALRRGGRFDREIEIGVP
DRDGRKEILQVHTRGMPLDEEIDLDHYAENTHGFVGADLEQLSKEAAMNALRRIRPQIDL
EADEIDAEILESMEVSETDFKEALKGIEPSALREVFVEVPDVSWEDVGGLGDTKERLRET
IQWPLEYPEVFEQMDMQAAKGVLLYGPPGTGKTLLAKAVANEAQSNFISVKGPELLNKYV
GESEKGVREVFEKARSNAPTVVFFDEIDSIAGERGQGMGDSGVGERVVSQLLTELDGIED
LEDVVVVATTNRPDLIDPALLRPGRLDRHVHVPVPDEEARRKIFEVHTQDKPLAEDVDLD
ELAAETDGYVGADIEALCREASMAASREFINSVSPEEVDDSVSNVRIGREHFEDAMDEVG
PSVDQETRERYEQIEERFDTRESELEESGNVGRTFQ
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcactgtcaaaccactcaagcagaaggacgcgggtcggggactcgccgcgatc
gatcgggtcgcgatggatgaactcgatctggagaacggcgattacattgtcatcgagggg
cggcagagcggtcgcgccgtcgcgcgcgtctggccgggctatcccgaggacagcggcgag
ggaatcgtccggatcgacgggcgactccggcaggaagccaacgtcgggatcgacgacacc
gtcgagatcgaaaaggccgatgtcaagcccgcccggtcgatcaccgtcgcactgccgcag
aacctccgcgtgcgcgggaacatcgctccccacgtccgcaacaagctcagcggtcaggcc
gtcacgcagggtcagaccgtcccgttctcgctgggattggggccgatctcgaacgtcggc
gggcagaagatcccgctgaagatcgccgagaccgatcccgagggaacggtcgtcgtgaca
gaccagaccgagatcgagatcagcgaacagccggccgagcagatcaccggcggacctcag
caggaagagcgagagacgcccagcgtcacctacgaggacatcggtgggctggacgaggag
ctcgaacaggtccgggagatgatcgaactcccgatgcgccaccccgagctcttccagcag
ctggggatcgaaccccccaagggcgtcctgctgcacggcccgccgggtaccggcaagacg
ctgatggcgaaagccgtcgctaacgagatcgacgcctactttacgacgatctcgggcccg
gagatcatgtcgaagttctacggcgagagcgaagagcaactccgcgaggtcttcgacgag
gccgaggagaacgcgccggcgatcgtcttcatcgacgaactcgactcgatcgcgcccaag
cgcggcgagacctccggcgacgtcgagcgccgggtcgtcgcccagctcctgagcctgatg
gacgggctcgaggagcgcggcgacgtcatcgtcatcggcgcgaccaaccgcgtggacgcc
gtcgatcccgcgctgcggcgcgggggccgattcgaccgggagatcgagatcggcgtcccc
gaccgcgacggtcgcaaggagatcctgcaggtccacactcgtgggatgcccctcgacgag
gagatcgacctcgaccactacgccgagaacacccacggcttcgtcggggccgacctcgaa
cagctgagcaaggaggccgcgatgaacgccttgcggcggatccgcccgcagatcgacctg
gaggccgacgagatcgacgccgagatccttgagtcgatggaggtctccgagaccgacttc
aaggaggcgctgaaggggatcgaaccgtcggcgctgcgggaggtcttcgtcgaggtcccg
gacgtctcctgggaagacgtgggcggtctcggagacaccaaagagcgcctgcgagagacg
atccagtggccactggagtacccggaggtcttcgagcagatggacatgcaggccgcgaag
ggcgtcctgctgtacggcccgccgggcactggcaagacgctgctggccaaggccgtcgct
aacgaggcccagagtaacttcatctccgtgaaggggccggaactgctcaacaagtacgtc
ggggaaagcgagaaaggcgttcgggaggtcttcgagaaggcccggtcgaacgcccccacg
gtcgtgttcttcgacgagatcgactcgatcgccggcgaacgcggccagggtatgggcgat
tccggcgtcggtgaacgcgtcgtctcccagttgctgaccgaactcgacgggatcgaggac
ctggaggacgtcgtcgtcgtcgcgacgacgaaccggccggacctgatcgacccggcgctg
ttgcgtccgggtcggctggatcgacacgtccacgtgcccgtgccagacgaggaggcgcgc
cggaagatcttcgaggtccacactcaggacaagccgctggccgaggacgtcgatctggac
gaactcgccgccgagacggacggctacgtcggcgcggacatcgaggcgctgtgccgcgag
gcttcgatggctgcaagccgggagttcatcaacagcgtctcgccggaggaggtcgacgac
agcgtcagcaacgtccggatcggccgcgagcacttcgaggacgcgatggacgaggtcggc
cccagcgtcgatcaggagacccgcgaacgctacgagcagatcgaggagcgcttcgacacg
cgtgagagcgaactcgaagagagtggcaacgtcggccggaccttccagtga
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