Halapricum desulfuricans: HSR122_2738
Help
Entry
HSR122_2738 CDS
T07709
Symbol
topA
Name
(GenBank) Topoisomerase IA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hds
Halapricum desulfuricans
Brite
KEGG Orthology (KO) [BR:
hds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hds03032
]
HSR122_2738 (topA)
03400 DNA repair and recombination proteins [BR:
hds03400
]
HSR122_2738 (topA)
Enzymes [BR:
hds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HSR122_2738 (topA)
DNA replication proteins [BR:
hds03032
]
Prokaryotic type
DNA Topoisomerases
HSR122_2738 (topA)
DNA repair and recombination proteins [BR:
hds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HSR122_2738 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
Cdd1
HHH
Zn_ribbon_PaaD
DUF4332
Toprim_4
RecR_HhH
IMS_HHH_1
PI3K_P85_iSH2
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
QSG10112
UniProt:
A0A897NBU4
LinkDB
All DBs
Position
2581096..2583585
Genome browser
AA seq
829 aa
AA seq
DB search
MELIITEKDNAARRIADILSDGGADAERRNGVNVYGWGGKRCVGLSGHVVGVDFPGEYSD
WRDVQPVELIDAEVVKSPTRENIVAALRSLAREADEAVIATDYDREGELIGKEAYELIRA
ETDVPIKRVRFSSITETEVKQAFAEPDDLDFDLAAAGEARQIIDLIWGAALTRFLSLSAR
QLGDDFISVGRVQSPTLKLIVDREREIEAFDPDDYWEIAAELAKNGTSFEAQYFYDDDGS
EAERIWEESEAESAFERLHEQATATVESVRRRTRTDAPPAPFNTTAFIQAAGSLGYSAQR
AMSIAEELYTAGYVTYPRTDNTVYPDDLDPEDLLESFTETSPFGEDAAALLGSDDIEPTR
GDTESTDHPPIHPTGEFPDRNTLSEDEWEVYELIVRRFFATVAEPATWEHLRVVADADGL
RLKANGKRLIEAGYHEVYPYSSASETHVPDVQEGEQLAIEDVDLQAKQTQPPRRYGQSRL
VSKMEEMGIGTKATRHGTIEKLYDRGYIDGDPPRPTALAKAVVDAAEAFAELIVSEEMTA
QLEEDMTAIANGEATLEDVTDESREMLERVFEELHDSREAVGEHLQESLKEDRTIGSCPE
CGSDLVIRKSRHGSYFVGCDGYPECEYTLPLPSKGEPLVMDETCEEHDTHHVKMLAGSDT
FVHGCPRCQAEAADENEDRIIGDCPECGDEHGGELAIKHLRSGSRLVGCTRYPECEYSLP
LPRRGEIEVLDERCEEHDLPHLRILDGDDDDDPWELGCPVCNYEAYQARNAVEDLEDLDG
VGSKTAEKLSAAGVESPADLAGVEPDAVAEQVRGVSAEQVRDWQADLEA
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggagttgatcatcaccgagaaagacaacgccgcacggcgaatcgccgacatcctcagc
gacggcggggccgacgccgagcggcgcaacggcgtcaacgtctacgggtggggcggcaag
cgctgcgtcgggctgtcgggacacgtcgtcggcgtcgacttccccggggagtacagcgac
tggcgggacgtccagcccgtcgagttgatcgacgccgaggtcgtcaaatcgcccacccgg
gagaacatcgtcgcggcgttgcggagcctggcccgcgaggccgacgaggccgtcatcgcg
accgactacgaccgcgagggcgagctgatcggcaaggaagcgtacgagctcatccgcgcg
gagaccgacgtccccatcaagcgggtccggttctcctcgatcaccgaaaccgaggtcaag
caggcgttcgccgagcccgacgatctcgatttcgatctggccgccgcgggcgaggcacgc
cagatcatcgacctcatctggggagcggcgctgacgcgctttctctcgctgtccgcccgg
cagctgggcgacgatttcatctccgtcggtcgcgtgcagtccccgacgctcaaactgatc
gtcgaccgcgagcgcgagatcgaggcgttcgatcccgacgactactgggagatcgccgcc
gaactggcgaaaaacggcacgagtttcgaggcccagtacttctacgacgacgacggcagt
gaagcagagcgcatctgggaggagagcgaggccgagtcggccttcgagcgcctgcacgaa
caggcgacagcgacagtcgagagcgtccgtcgccgtacccggacggacgccccgcccgcg
ccgttcaacaccaccgcgttcattcaggccgccggctcgctgggctattccgcccagcga
gcgatgtcgatcgccgaggagctgtacaccgccgggtacgtcacctacccgcggacggac
aacacggtctatcccgacgacctcgatcccgaggacctgctcgaatcgttcaccgagacc
agccccttcggcgaggacgcggcggcgttgctgggcagcgacgacatcgagccgactcgc
ggcgacaccgagtcgacagaccacccgccgatccacccgacgggggagttccccgaccga
aacaccctctccgaggacgagtgggaggtctacgaactgatcgtccggcggttcttcgcg
acggtcgccgagccagccacctgggaacacctgcgcgtggtcgccgacgccgatggcctg
cggctgaaggccaacggcaagcgtctgatcgaagccggctatcacgaggtctatccctac
tccagcgccagcgagacccacgtccccgacgtccaggaaggcgagcaactggcgatcgag
gacgtcgatctgcaggccaaacagacccagccgccacgacggtacggccagtcgcggctc
gtctcgaagatggaggagatgggcatcgggaccaaggcgactcgccacgggacgatcgag
aagctatacgatcgcggctacatcgacggcgacccgccgcgtccgacggcgctggcgaag
gcggtcgtcgacgccgcggaggcgttcgcagagctgatcgtcagcgaggagatgaccgcc
cagctggaagaagacatgaccgccatcgccaacggcgaggccaccctcgaagacgtgacc
gacgagtcccgggagatgctcgagcgcgtcttcgaggaactgcacgactcccgcgaggcg
gtcggcgagcaccttcaggaatcgttaaaggaagaccggacgatcggctcctgcccggag
tgtggatcggacctggtgattcggaagtcccgccacgggtcgtacttcgtcggctgtgac
ggctaccccgagtgtgagtacacgctcccgctgccctcgaagggcgagccgctggtcatg
gacgagacctgcgaggaacacgacacccatcacgtcaagatgctggccggtagcgacacg
ttcgtccacgggtgtccgcgctgtcaggccgaggccgccgacgagaacgaagaccggatc
atcggggactgtcccgagtgtggtgacgagcacggcggcgaactggcgatcaagcacctc
cgctccggatcacggctcgtcggctgtacccgctatccggagtgtgaatactcgctgccg
ttgccccgccgcggcgagattgaggtgctagacgagcgctgtgaggaacacgacctcccg
catctgcgtatcctcgatggcgatgacgacgatgatccctgggagttgggctgtccggtc
tgcaactacgaggcgtatcaggcccgcaatgctgtcgaggacctcgaggatctcgacggt
gtcggctcgaagactgcggagaaactgtcggcagccggcgtcgagtcacccgctgatctg
gccggagtcgaacctgacgcagtcgctgaacaggtccgaggcgtgagcgccgagcaggtt
cgcgactggcaggctgatctcgaagcctga
DBGET
integrated database retrieval system
