Hyphomicrobium denitrificans 1NES1: HYPDE_24418
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Entry
HYPDE_24418 CDS
T02646
Name
(GenBank) phenylalanyl-tRNA synthetase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HYPDE_24418
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hdt01007
]
HYPDE_24418
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdt03016
]
HYPDE_24418
Enzymes [BR:
hdt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
HYPDE_24418
Amino acid related enzymes [BR:
hdt01007
]
Aminoacyl-tRNA synthetase
Class II (U)
HYPDE_24418
Transfer RNA biogenesis [BR:
hdt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HYPDE_24418
Prokaryotic type
HYPDE_24418
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
AGK56569
UniProt:
N0AZK7
LinkDB
All DBs
Position
complement(369537..371969)
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AA seq
810 aa
AA seq
DB search
MKFTFSWLKDHLDTTASLDEIETTLSAIGLEVESVEDPAKLLGAFRIARIVEAKKHPNAD
KLQVVQVEIAKGAPLMEVVCGAPNARAGMVAVFAPLGTYIPGSKITLEKKPVRGVVSNGM
MCSAAELELSDESDGILDLPAEWASKVGERYIDVADLNDPVIEVKLTPNRPDCTGVRGIA
RDLAAAGLGTLKPEPKLEPIKEAFECSIPVKLEFTAETANACPVFAARTIRNVSNGPSPD
WLQRRLKAVGLRPINALVDVTNYISLDRGRPLHVYDAHKLKGAIHARLGKTGEKFLALDG
KEYTVDNTMCVIADDTGPLGLGGVMGGESTGCTPETTAVLIESAWFDPVRTAATGRKTGL
VTDARYRFERGVDPASVRPGLDLATDMILKFCGGEVSKAKIAGKEPIENRVIPFDFAHVE
KLTGVTLPDAEISKILTAFGFKIESKPNAAKITVPTWRPDVHGAADLVEEVVRIAGLDLI
PATPLPRLDGVARPVLTEKQKRARRARRLLASRGFVEAVTWSFIPKDQATHFGGGAEALD
LANPISTEMSSMRPGLLPGLLTAVTRNRNRGAADVALFELGQAYRGERPEDQYLSAAAVR
AGTSRFNGSGRHWHGAAAAVDVFDVKADVFAALAALDLDANKAQITRDCPPWYHPGRSGT
LRLGPKTVLAYFGEIHPVTLKALDVEAPVAAFEIFIDALPPEKKKSRAKPQLAASDLLPV
KRDLAFVVAKDVAAGDVIKAASNADKTLIRAVNVFDVFEGGNLAAEGKKSIAVEVTIQPV
AETLTDQAIDTIIKKIVADVKKATGAELRS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcacgttctcctggcttaaagaccatctcgacacgaccgcatcgctcgatgag
atcgagacgacgctgtccgccatcggtcttgaggtcgaaagcgtcgaagaccccgcgaaa
ttgctcggcgccttccgcatcgcgcgtatcgtcgaagccaagaagcatccgaacgccgac
aagctgcaggttgtccaagtcgagattgcaaaaggcgcgcctctaatggaggtcgtctgc
ggcgcaccgaacgcccgcgctggaatggtcgccgtgttcgctccgctcggaacctacatc
ccaggttcgaaaatcacgcttgagaagaagcctgtccgcggcgtcgtctcgaacggcatg
atgtgctcggccgccgagctcgagctctccgacgaaagcgacggcattcttgatttgccc
gccgaatgggcaagcaaggttggcgagcgctacatcgatgtcgccgacctcaacgatccc
gtcatcgaagtgaagctgacgccgaaccgccccgattgcaccggcgttcgcggcattgcg
cgcgacctcgcagcggcagggctcggtacattgaagccggaaccgaagctcgaaccgatc
aaggaagcgttcgagtgcagcattccggtgaagctcgaattcacggccgagacagcgaac
gcttgccccgtcttcgcggcgcgcacgatccgcaatgtctcgaacgggccgtcgccggac
tggctgcagcgtcgcctgaaggccgtcggcctgcgccccatcaatgcgctcgtcgacgtc
acgaactacatctcgctcgatcgcggacgaccacttcatgtctacgacgcacataagcta
aagggcgcgatccacgcgcgcctcggaaaaactggcgagaaattcctcgcgctcgacggc
aaagaatacaccgtcgacaatacgatgtgcgtcatcgccgatgacacggggccactgggg
ctcggcggcgtcatgggcggagagtcgaccggctgcacgccggagacgacagccgtcctg
atcgagagcgcttggttcgatccggtgcgcactgcagcgaccggccgcaagaccggtctc
gtcaccgacgcacgctaccgtttcgaacgcggcgtcgatccggcctccgttcgcccgggc
ctcgacctcgcgaccgacatgatcctgaaattctgcggcggcgaggtttcaaaagcaaaa
atcgccggcaaggagccgatcgagaaccgcgtcattccgttcgatttcgcgcacgtcgaa
aagctgacgggcgttacgctcccggacgctgagatctcgaagattctgacggcgttcggc
ttcaagatcgaaagcaagccgaacgccgcaaagatcaccgtgccgacgtggcggccggac
gtgcatggcgccgccgacctcgtcgaagaagtcgtgcgtatcgccggtctcgacctcatt
ccggcgacgcctctgccgcgcctcgatggcgtcgcacgccccgtgctgaccgaaaagcag
aaacgcgcacgccgcgcccggcgcttgctcgcatcgcgcggcttcgtcgaagcggtgacc
tggagcttcatcccgaaggatcaggcaacgcattttggtggtggcgccgaggccctcgac
ctagccaacccgatctcgacggaaatgtcgtcgatgcggcccggccttctgccgggattg
ctgacggcggttacccgcaatcgcaaccgcggcgccgccgacgtcgcgctgttcgagctt
ggccaagcctatcgcggcgaacggcccgaagaccagtatctgagcgccgcggccgtgcgc
gccggaacgtcacgtttcaacggctctggccgccactggcacggagcggcagcggccgtc
gacgtcttcgatgtcaaagccgatgtgttcgccgctcttgccgcgctcgacctcgacgcg
aacaaagcccagatcacgagggattgcccgccctggtatcatccgggccgctccggcact
cttcggctcggtccgaaaacggtgctcgcctatttcggcgagatccacccggtgacgctc
aaagcgctcgacgtcgaagcgcccgtcgccgcgttcgaaatcttcatcgatgccctgccg
cccgaaaagaagaaatcgcgggcaaagcctcagcttgccgcatctgatctattacccgtc
aagcgcgacctcgcgttcgtcgtggcgaaggacgtcgcggcaggcgatgtgatcaaagcc
gcaagcaatgccgacaagaccctcatccgtgccgtcaacgtctttgacgtgttcgagggc
ggcaacctcgcggccgagggcaaaaagtcgatcgcggtcgaggtgaccattcaaccggtc
gctgaaacactcacggaccaggctatcgatacgattatcaaaaaaatagttgccgatgtt
aagaaggcgaccggcgccgagcttcgatcttga
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