Hyphomicrobium denitrificans 1NES1: HYPDE_24523 Help Entry HYPDE_24523       CDS       T02646                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism hdt  Hyphomicrobium denitrificans 1NES1 Pathway hdt02020   Two-component system hdt02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:hdt00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     HYPDE_24523  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     HYPDE_24523  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hdt03021]     HYPDE_24523 Transcription machinery [BR:hdt03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      HYPDE_24523 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Arg_repressor Motif Other DBs NCBI-ProteinID:  AGK56590 UniProt:  N0B963 LinkDB All DBs Position complement(387973..389505) Genome browser AA seq 510 aa AA seqDB search MALSAKLELRQGQQLVMTPQLQQAIRLLQLSNLELTEFVDAELERNPLLEREEASAGPKP SEETAPPNDKPAAGDEERWLDLRQPVQDHTGGLDADFGNVFQGPGTGEPVGSGPTAGLGW ANVTQRMHTAGEEDSDLEDYVANQISLRDHLTAQLPLTITDPVERLIGQYLIDLVDEAGY IPANLEPLSERLGAPLELVESVLGKLQTFDPPGIFARSLAECLALQLKDQNRYDPLMAQL LANLDHLGNRNLAALKKAVGVDMDELADMIREIKRLNPKPGLKFGSVQVQPVVPDVIVRA ASDGGWHVELNSDTLPRVLVNRTYYTRIAKSATNERDKGYLFDCLQTANWLVKSLDQRAR TILKVAEQIVRQQDSFFMYGVQHLRPLNLRVIADAISMHESTVSRVTSNKYIATPRGIYE LKYFFTSAIASAADGEAHSSESVRHRIKQMIDAEHADAVLSDDQLVDRLKSEGIDIARRT VAKYREAMRIPSSVQRRRDKRLVERLGGTA NT seq 1533 nt NT seq  +upstreamnt  +downstreamnt atggcgctttcggccaaacttgagctgaggcagggccagcagctggtgatgacaccgcag ctgcagcaggccatccggctcctgcagctctcgaatctcgagcttaccgagttcgtcgac gccgaacttgagcgcaatcccctgctcgaacgtgaggaagcaagcgccggcccgaagccc tcggaagaaaccgcaccacccaatgacaagcccgcagcgggcgacgaggaacgttggctg gacctgagacagcccgttcaggatcatacgggcggtctggacgccgacttcggcaacgtc ttccagggaccgggtaccggcgagcccgttgggagcgggccgaccgctggcctcggctgg gcgaacgttacgcagcgcatgcacacggccggcgaagaggacagcgatctggaggattac gtcgccaaccagatatcgctccgcgatcaccttaccgctcagttgccgctgacgatcacc gatccggtcgaacgccttattggacaatacctcatcgatctcgtcgatgaggcgggctac atccccgcgaatctcgaaccgctatcggaacgccttggcgcaccgctggaactcgtagaa agcgtcctcggcaagctgcagacattcgatccgccggggattttcgcccgctcgctcgcc gaatgtctggctttgcagctcaaggatcaaaaccgttacgatccgttgatggcccagttg cttgccaacttggatcacctcggcaatcgcaatctcgcggccctgaagaaggcagtcggc gtcgatatggacgaactcgcggatatgatccgcgagatcaagcggcttaatccgaaaccc ggcctgaagtttggttccgtacaagtgcagccggtcgtgccggacgttatcgtccgcgcc gcgtccgacggcggctggcacgtcgagctgaacagcgacacgctgccccgcgttctcgtc aaccgcacatactacacacgcatcgccaagtccgcgacgaacgaacgcgacaagggctat ctctttgactgcctgcagactgcgaactggcttgtcaaaagcctcgaccagcgcgcgcgc acgattctgaaggtcgccgagcagatcgtgcgtcagcaggacagcttctttatgtatggc gtgcagcatttgcgaccgctgaacctcagagtcattgccgacgccatctcgatgcacgaa tcgacggtctcgcgcgtcacctccaacaaatacattgcaaccccgcgcggcatctacgag ttgaagtacttcttcacgtcagccattgcgtccgccgccgatggcgaagcccattcgtcc gagtccgtccgccatcgcatcaaacagatgatagacgcagagcacgccgacgcggtcctg tccgacgatcagctcgtcgacaggttgaaaagcgaaggcatcgacatcgcccgccgcacg gttgcgaagtatcgcgaggccatgcgcattccgtcctccgtgcagcggcgccgcgacaag agactagtcgaaagactaggcggcacggcctga

DBGET integrated database retrieval system