Hyphomicrobium denitrificans 1NES1: HYPDE_25218
Help
Entry
HYPDE_25218 CDS
T02646
Name
(GenBank) ABC transporter periplasmic substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt02010
ABC transporters
hdt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HYPDE_25218
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HYPDE_25218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hdt02000
]
HYPDE_25218
Transporters [BR:
hdt02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
HYPDE_25218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Lipase_GDSL
FAS_AT_central
Motif
Other DBs
NCBI-ProteinID:
AGK56728
UniProt:
N0B199
LinkDB
All DBs
Position
532161..533393
Genome browser
AA seq
410 aa
AA seq
DB search
MPRTVIDADKILKIGMLAPLSGKMKSWAEPGFMGCLIWKDWVNKKGGIRIGDRRYQVDVI
PYDTQFRPEKALAGARKLLIDHGVQLVMMLGGNDFSRPLRDFVNQRKALVTTLLPSDLSP
NARTLIAPCEVHPIYNVTGVDWLVRDDPRLKTVAMCTQNDEHGLPSIATYRAAFEAAGLT
LVDEHLFPNQTSDFSEIIGRLLEKKPDVLCWDTAYEPFVHAMTIEAYKRGFKGRIISCTC
DNYLELIEKTSPEFMENFVFQFPDFDDPRLNEPQINFGDPAGFFNEFCRRYPGEWSAVSW
EYAAILQMWKVAVERARTIEPLTVLAMMKVGGKGKHVFGEATWWGRELFGIDNALVGDWP
VVAIRNGRARIVEFGSPLTWWKSYGYLLIKHMRALNLMWDQREEKLALSR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
ttgccccggaccgtcatcgacgcagataagattcttaaaatcgggatgctcgcgccgctg
tcggggaaaatgaaatcctgggccgaaccggggttcatgggctgcctcatctggaaggat
tgggtgaacaagaagggtggaattcggatcggagatcgccgctaccaggtcgatgtcatt
ccctacgacacgcagttcaggcccgaaaaagccttagccggtgctcgaaaattgcttatc
gatcacggtgtgcagttggtgatgatgcttggcggcaatgatttctcccgcccgctgcgt
gatttcgtcaaccagcgcaaagcgctggttacaaccttgttgccgagcgatctgtcgcca
aatgcccgcacgctgatcgcaccctgcgaagtccaccctatctacaacgtaaccggcgtc
gattggctggttcgggatgatccgaggctcaagacggtggcgatgtgcacccagaacgac
gagcatgggctgccgtcgatcgccacctatcgtgcggctttcgaggcggcgggcctgacg
cttgtcgacgagcatctgtttcccaaccagacaagcgatttttccgagattatcgggcga
ttgctcgaaaagaagccggatgtgctgtgctgggataccgcgtacgagccgttcgtgcat
gcgatgacgatcgaggcttacaaacgcggcttcaagggccggatcatctcttgtacgtgt
gacaactatctagagctgatcgagaaaacgagcccggagttcatggagaattttgtcttc
cagtttccggacttcgacgacccgcggctcaacgagccccagatcaattttggcgatccg
gccggtttttttaatgagttttgccgccgctacccgggagagtggagtgccgtgtcgtgg
gaatatgccgcgatccttcaaatgtggaaggtcgcagtcgaacgcgcccgcacgatcgag
cctttgacggtgctggcgatgatgaaagtcggcggaaagggcaagcacgttttcggtgaa
gcgacatggtgggggcgtgagctgttcggcatcgataacgcgctcgtcggggattggcct
gtcgttgcaattcgcaacggccgggctcggatcgtcgagttcggctcgcctctcacgtgg
tggaagtcatacggatatctgctgatcaaacatatgcgtgccctcaatctgatgtgggat
cagagagaagaaaaattggcgttgagccgctga
DBGET
integrated database retrieval system
