Hyphomicrobium denitrificans 1NES1: HYPDE_25548
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Entry
HYPDE_25548 CDS
T02646
Name
(GenBank) selenocysteine synthase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00450
Selenocompound metabolism
hdt00970
Aminoacyl-tRNA biosynthesis
hdt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HYPDE_25548
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HYPDE_25548
Enzymes [BR:
hdt01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
HYPDE_25548
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Gene cluster
GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
Beta_elim_lyase
Ribonuclease_P
MACPF_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AGK56794
UniProt:
N0B017
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All DBs
Position
complement(601208..602683)
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AA seq
491 aa
AA seq
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MAVLPAGTQRRCAARRFCFEAVLERRIEPGLRNLPSVDAVLKTNTAAMLVERFGRNAAVS
AIRTALKDARIALKSGILSAHTTEHLAQQALAKLSEEDRSSLRTLFNLTGTVLHTNLGRA
LLAEEAITAATEAMRNAVALEFDLTSGKRGERDDHVRSILCDLTGAEDATVVNNNAAAVL
LALNTLAGGRDAIVSRGELIEIGGAFRMPDIMMRAGARLVEVGTTNRTHASDYERALKPE
TGVILKVHTSNYCIMGFTAEVSAGDLAAIAADANVPLMHDLGSGTLLDLTRFGLEKEPTV
RDAVAHAGLVTFSGDKLLGGPQAGFIVGKRSLIQAINRNPMKRALRVDKIRLAAIEATLK
LYRNPERLAERLPTLKLLARTQADIRDQVERILARTTDCVGAAFAVEICDCQSQIGSGAL
PLATLPSAGIRIHVKHGGGQALEKLAAAMRALDRPIVGRIEDNSLILDFRCLTDEAGFLS
ALSLLDRSALA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
gtggcagttctgccggccgggacgcaaaggcggtgcgccgcccggcgattttgtttcgag
gccgttttggaacgccgaatagaacccgggctccgcaatttgccgtcggtcgacgcggtc
ctcaagacgaatacggccgcaatgcttgtagagcgattcggccgcaacgcggcggtgagc
gccatacggacggcgctcaaggacgcgcgcatcgcgttgaaatcgggcatcttatccgca
cacacaacggagcatctcgcgcagcaagccctcgccaagctcagcgaggaagaccgatcg
agcctccggacgcttttcaacttaacgggaaccgtcctgcacaccaatctcggtcgggcc
ttgcttgcagaggaagctatcaccgccgcaacggaggccatgcgcaacgccgtcgcgctt
gagttcgatttaacgagcggcaaacgcggcgaacgcgacgatcacgtgaggtcgattctg
tgcgacctcaccggagcggaggacgcgaccgtcgtcaacaacaacgcagccgcggttctt
ttggcgctcaatacgctcgccggagggcgcgatgcgatcgtatcccgaggcgaattgatc
gagatcggcggcgccttccgaatgcccgacatcatgatgcgcgccggagcacggctggtc
gaggtcgggacgaccaatcgtacccacgccagcgactatgagagagcactgaagcccgaa
acaggcgtcattctgaaggtccatacgtccaactactgcatcatgggatttaccgccgaa
gtgagcgcgggagatcttgcagcgatcgcggcggatgcgaacgtcccgctgatgcacgat
ctcggatcgggcacacttctggacctgacacgctttgggctcgaaaaggaacctacggtt
cgagacgcggttgcacacgcgggccttgtaactttctccggagacaagctgctcggtgga
cctcaggcggggttcatcgtcggcaagcgcagcttgatccaagcgatcaaccgcaatccg
atgaagcgcgcgctccgcgtcgacaagattcggctggcggcaatcgaggccactctgaag
ttgtatcgaaacccagagcgcctcgccgagcggcttccaacgctcaagctgctggcgcga
acgcaggcggatatccgcgatcaggttgagcgcattctggccaggacaacggactgtgtc
ggcgcagcctttgccgtcgagatttgcgactgtcagagtcagatcggatcgggcgcgttg
cctctcgcgacgctaccgagtgccggcattcgcattcatgtgaagcacggcggtgggcaa
gcgcttgaaaagcttgcggcggcaatgcgcgccctcgatcggccaatcgtcggcagaata
gaagataatagcctcatcctggatttcaggtgtttgaccgatgaagccggatttctttca
gctttgtctttgctcgatcgtagcgcattagcctga
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