Hyphomicrobium denitrificans 1NES1: HYPDE_27088
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Entry
HYPDE_27088 CDS
T02646
Name
(GenBank) Fmu (Sun) domain-containing protein
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hdt03009
]
HYPDE_27088
Enzymes [BR:
hdt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HYPDE_27088
Ribosome biogenesis [BR:
hdt03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HYPDE_27088
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
RsmF-B_ferredox
Methyltransf_25
Ubie_methyltran
FtsJ
Cons_hypoth95
Methyltransf_12
MTS
Methyltransf_15
PrmA
Methyltransf_3
Motif
Other DBs
NCBI-ProteinID:
AGK57097
UniProt:
N0B4F6
LinkDB
All DBs
Position
902923..904218
Genome browser
AA seq
431 aa
AA seq
DB search
MRPGARIAAAIEVLEAILNRYQPVTIALTDWGKAHRFAGSGDRNAIGGLVYDALRRRASL
AWALGEDSPRALAIGAAPSALGLSADVVIAACDGSEHAPPPLSDAERAGLTRDMSAAPDA
VRADIPEWLWPSFSAQFGENAVAEGEAMARRAPADLRINTLKSTPEKVLKALLPFGALPC
PVSPVGVRVPAPAGAQRTPNLQAEAAFQAGWFEIQDEGSQIAALLSGAGPRKQVLDLCAG
AGGKTLALAALMQNTGQLYAYDADRYQLKPIFERIKRAGVRNVQVLRAGDEAALAALGPR
FDVVLADAPCTGTGTWRRRPDAKWRLKPEALAARQAEQRSVLGRAASLVKPGGRLVYVTC
SILPEENVEQVAAFLETHDAFQAVPTGDAWAAAGLPGEVPASADGRSDSLLLTPARHGTD
GFFIAALTRVA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagacctggagcccggatcgccgcggcgatcgaggttctggaggcgatcctcaatcgt
taccagcccgtcaccatcgcactgaccgattggggcaaggcgcatcgctttgccggttcc
ggtgatcgcaacgcgatcggcgggcttgtctatgatgcgcttcggcggcgcgcctcgctt
gcctgggcgctgggagaggacagtccgcgcgctcttgccatcggagctgcaccgtcggct
ctcgggctgtcggcggatgttgtgatcgcagcttgcgacgggtccgaacacgcgccaccg
ccgttgtcggacgcagagcgcgccggactgacgcgcgatatgagcgcggcgcccgatgcc
gtacgcgccgatattccggagtggctttggccctccttttcagcgcagttcggagaaaat
gccgtagctgaaggggaagcgatggcgcggcgggcgccagccgatctgcggatcaacacg
ctgaagtcgacaccggaaaaagtcctgaaggcgcttctcccgttcggtgcgttgccgtgc
ccggtttcgcctgtcggagttcgcgtccccgcccctgccggtgctcagcggacgccgaac
ctgcaggccgaggcggcgtttcaggcgggctggttcgagattcaggacgagggatcgcag
atcgccgcacttttgtccggtgcgggcccgagaaaacaggtcctcgacctttgcgccggc
gcggggggaaagactctggcgcttgcggccctgatgcagaacaccgggcagctctacgcc
tacgatgcagaccgttatcagttgaagccgattttcgagcggatcaagcgcgcgggcgtt
cgcaacgtgcaggttcttcgcgcgggcgatgaggcagcgctcgcggcgctcggcccgcgc
ttcgacgtcgttttggcagacgctccgtgcaccggtacgggcacgtggcggcggcgtccg
gatgccaagtggcggctgaagcccgaagcgctcgccgcgcgccaagccgagcaacggtcg
gtgcttggccgcgcggcgtcgctggtgaagccaggcgggcggctcgtgtacgtcacctgc
tcgattttgcccgaggagaatgtcgagcaggttgcggcgttcttggaaacgcatgacgcg
tttcaagccgtaccgaccggcgacgcctgggcggctgccggtctgcccggtgaagttcca
gcctcggccgatggccgatccgactcgctcctgcttacgcctgcccgtcacggcacggac
ggcttcttcatcgcggccctgacccgggtggcttaa
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