KEGG   Hyphomicrobium denitrificans 1NES1: HYPDE_27423
Entry
HYPDE_27423       CDS       T02646                                 
Name
(GenBank) conjugal transfer protein TrbL
  KO
K07344  type IV secretion system protein TrbL
Organism
hdt  Hyphomicrobium denitrificans 1NES1
Pathway
hdt02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hdt00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HYPDE_27423
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hdt02044]
    HYPDE_27423
Secretion system [BR:hdt02044]
 Type IV secretion system
  Trb secretion system protein
   HYPDE_27423
SSDB
Motif
Pfam: TrbL
Other DBs
NCBI-ProteinID: AGK57164
UniProt: N0B117
LinkDB
Position
complement(955962..957227)
AA seq 421 aa
MGGTGVIDNFLGTFTRYIDSGFGLVQGDVRWLAGVLIAIDITLAGLFWAMAPDEDVLARL
IKKTLYIGVFAFIIGNYNNLAQIIYNSFAGLGIEAGGGTLSAAQLLQPGKIAEVGIDAGK
PILTAISGMMGFTSVFANLVQIIILLAAWLIVVISFFVMAIQLFVSLIEFKLTTLAGFVL
VPFGLFGRTAFLAERVLGNVVSSGIKILVLAVIIGIGSTIFNQFTSGFNNPPTISDALTL
ILAALSLLGLTIFGPGIANGLIAGGPQLGAGAAVGTGLAAAGIGAAGIAATAGGLAAAGG
AIAGTARAGASVAGGATAAFRAGGATGVAQAAGSAAISPLRRAAASLKESFASGERAVLR
GSAPASAGGAGSSASSDSPPAWAQRMKRSQTINRGVTAADHAIRAGDRPSGGSQVDLSEG
E
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgggcggcacgggcgtcatcgacaatttcctggggacgttcacccgatacatcgattcc
ggcttcggcttggttcagggcgatgtgcgctggctcgccggtgtgctcatcgccatcgac
atcacgcttgctggtctgttctgggccatggcgcccgacgaggacgtgctcgcgcgactg
atcaagaagacgctctatatcggcgtcttcgccttcatcatcggcaactacaacaacctc
gcgcagatcatctacaacagcttcgccggcctcggcatcgaggccggcggcggcacgctg
agcgccgcgcagcttcttcagccgggcaagatcgccgaggtcggcatcgacgccggcaag
ccgatcctcaccgccatctccggcatgatgggcttcacgagcgtcttcgcgaacctcgtg
cagatcatcatcttgctcgccgcctggctgatcgtcgtcatcagcttcttcgtcatggcg
atccagctcttcgtcagcttgatcgagttcaagctgacgacgcttgccggatttgtcctg
gtcccgttcggactcttcggccgcacggcctttctcgccgagcgcgttctcggcaacgtc
gtctcttccggcatcaagatcctggtgctcgcagtcatcatcgggatcggttcgacgatc
ttcaatcagttcaccagcggcttcaacaacccgccgacgatttccgatgcgctgactctc
atcctcgcggcgctttcgttgctcggtctcacaatcttcggccccggcatcgccaacggt
ttgatcgccggtggaccgcagctcggcgctggcgccgccgtcggaaccggtctcgcggcc
gccgggatcggcgcggctggcattgctgccacagccggtggccttgccgccgcgggcggg
gcaatcgccggcacagcgcgtgcgggcgcgtccgtcgcgggcggggcgacggccgccttt
cgcgcgggcggcgccaccggggtcgcgcaggcagccggatctgcggccatcagcccgctc
cgccgtgcggcagccagcctgaaagagagcttcgcatccggcgaacgcgcagtgctgcgc
ggaagcgcgccggcgagcgcaggcggcgcgggatcctccgcctcttcggacagcccgccg
gcttgggcccagcgcatgaaacgcagccagaccatcaaccgcggcgtgaccgccgccgac
cacgccatccgcgccggcgaccggccgagtggcggcagccaggtcgatctctccgaaggg
gaatga

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