Hyphomicrobium denitrificans 1NES1: HYPDE_27603
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Entry
HYPDE_27603 CDS
T02646
Name
(GenBank) methylase/helicase
KO
K26273
protein strawberry notch
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hdt03036
]
HYPDE_27603
Chromosome and associated proteins [BR:
hdt03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
HYPDE_27603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
AGK57200
UniProt:
N0BAP4
LinkDB
All DBs
Position
complement(982940..987265)
Genome browser
AA seq
1441 aa
AA seq
DB search
MTTVSRVAAACAAAPSPTSASAGILQAARLLLPDLERGRRIDAGVLRFAMETAFGASDAV
GAWDWKTAYDACEAATVLFLRKYGKALLRKADSPASRLAALTKIAGLLPTHTRRSEESQA
LQQFSTPIALGLAACTAAAITSTDRVLEPSAGTGLLAILAEIAGGALVLNELADTRAALL
DHLFPGITASRFDAAQIDDHLDAAVTPTIVLMNPPFSAIANVDRHMADAAYRHVASALAR
LAIGGRLVAITGANFSPETPAWRDAFARLQERGRIVFTAAIDGAVYAKHGTTTETRLTVI
DRVPAPDPAWFPPSAGSAPDVATLLAWIAEHVPPRRSITTTLRTAPVANSATPRTVRGHL
ARAAARPAAAAIAEPEGVELACETVDWTPPEGSRLTDALYEAYVLQSIRIPGSQAHPTKL
VQSAAMASVAPPQPSYRPHLPATLITDGLLSDAQLESVIYAGEAHADFLAGSWAVDETLD
LVTATRDDAENAVRFRRGWFLGDGTGAGKGRQVAGILLDNWLKGRRRAVWISKSDKLIED
AQRDWSALGMERLLVTPLSRFRQGTPIRLAEGVLFATYATLRTDERGEKLSRVRQIVEWL
GSGFDGVIIFDESHAMQNAVGGKGERGEQAPSQQGRAGLRLQHALPNARVVYVSATGATT
VHNLAYAQRLGLWGGEDFPFATRAEFVEAIEDGGVAAMEVLARDLKALGLYAARSLSYEG
VEYELVEHQFTPEQIRIYDAYAGAFSIIHNNLDAAMRAANITGETGTLNAQAKSAARSAF
ESAKQRFFGHLLTSMKTPSLMRSIERDLEAGHAAVIQLVSTGEALMERRLAEIPTEDWGD
VQVDITPREYVLDYLAHSFPVQLYEPFTDSEGNLSSRPVYRDGQPVESRDAVARRDRLIE
KLASLPPVPGALDQIVQRFGTDTVAEVTGRSRRVIRKGDRLQVENRAASANLAETAAFMD
DAKRILVFSDAGGTGRSYHAELSARNRRLRIHYLLEPGWKADAAIQGLGRTNRTNQAQPP
LFRPIATDVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESHYGRDALRQL
YMLLARGKVEGCSLQTFEDSTGLKLTDANGIKDELPPITTFLNRLLALTIDLQNVLFTAF
EQLLTARIEGAIASGTYDVGLETLRAESFVVTDRRTIYTHPGTGAETRLLTITERQRNHP
VTLDEGLDRLSDPRALLLINERSGRAAVQVPAPSLMLDDGEIERRVRLIRPMENHSLPLK
AMAESHWTEADRGRFAAAWAAELGEVPEFTDSTVHVVAGLLLPIWKRLPNESTRVYRLQT
DAGERIIGRKVSPAWVATALAADALTLTPENAFAALLEGRTVFDLAEGLQLRRVRVMGAE
RIELSGFNDTMRDRLKVYGLFHEIISWKLRMFVPTDATGAAVLARVLDRYPVERIAEREA
A
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgtttcccgcgtcgcggccgcctgtgcggctgcgccatcgcccacatccgca
tctgccggcatcctccaggccgcgcggcttctccttcccgatctcgaacgcggacggcgc
atcgacgccggtgtcctgcggttcgcaatggagacagccttcggcgcttccgatgccgtc
ggcgcatgggactggaagactgcctacgatgcttgtgaggcggccaccgtcctgttcctg
cgcaaatacggtaaggcgcttttacgcaaagccgactctccggcttcacgacttgccgca
ctgacgaagatcgccggccttctgcccacccacacgcggcgttccgaggagagccaggcg
ctccaacaattctcgacgccgatcgcgctcggtctcgcggcctgcaccgcagccgccatt
acctcgactgaccgcgtgctggagccctccgccggcactgggctcctcgccatcctggct
gagatcgccggcggcgcgctcgtgctgaacgagctggccgatactcgcgccgcgctcctc
gaccacctctttcccggcatcaccgccagtcgcttcgatgcagcgcagatcgacgatcat
ctcgacgctgcggtaacgccaacaatcgtgctgatgaacccgccattctccgcaatcgcg
aatgtcgatcgccacatggccgacgctgcttatcgtcacgtcgcctcggcgctagcgcgt
ctcgccattggtgggcggctcgtggcaatcaccggcgccaatttcagtcccgagacgccg
gcctggcgcgatgccttcgcccgcctccaggagcgcggccgcatcgtgttcaccgcggcg
atcgatggcgcagtctatgccaagcatggcacgacgaccgagacccgcctcaccgtcatc
gatcgtgtgccggcgcctgacccggcgtggtttccaccgtccgcagggagcgcgcccgat
gtggcgacgctgctcgcctggatcgcagagcacgtcccgccacgacgctcgatcaccacg
acgctccgcacggcgccggtggcgaattccgcaaccccgcgtaccgttcgcggccatctc
gcgcgtgccgcagcgcggccagcggcggcggccatcgccgagcccgaaggtgtcgagctt
gcctgcgagaccgtggactggacgccgcccgaggggagccgtctcacggatgcgctttat
gaagcatacgtccttcagtcgatccgtattcccggctctcaggcgcatccaacgaagctg
gtgcagtctgcggcgatggcctcggtcgcgccaccccaaccctcgtatcggccgcatctc
ccggcaactctcatcaccgatggcctgctgtccgacgcgcagctcgagagcgtcatctac
gccggcgaggcccatgccgatttcctcgccgggtcgtgggcggttgatgagactctcgac
ctcgtcaccgccacgcgcgacgatgcggagaacgccgtccgctttcgccgtggctggttt
ctcggcgatggcaccggcgccggcaagggccgccaagtcgccggcatcctcctcgacaat
tggctgaaaggccggcggcgcgccgtctggatcagcaagtccgacaagctgatcgaggac
gcgcagcgcgactggtcggcgctcggcatggagcggctcctcgtgacgccgctctcgcgc
tttcgccagggcacgccgatccggctcgcggaaggcgtcctatttgcgacctatgccacg
ctgcgcaccgacgaacgcggcgagaagctttcgcgcgtccggcagatcgtcgaatggttg
ggctccggtttcgatggagtgatcatcttcgacgagtcgcatgcgatgcagaacgccgtc
ggcggcaaaggcgagcgcggcgagcaggcgccgtcgcagcagggacgcgcgggcctcaga
ctccagcacgccctgccgaacgctcgcgtcgtctacgtctcagcgaccggcgcgacgacg
gtccacaacctcgcttatgcgcaacgcctcggcttgtggggcggcgaagattttcctttc
gccacgcgcgccgagttcgtcgaagcgatcgaagacggtggcgtcgcggcgatggaagta
ctggcacgagatctcaaggcgctcggcctctatgcggcccgctcgctctcctacgaaggc
gtcgaatacgagctcgtcgagcaccagttcacgccggagcagatccgcatctacgatgcc
tatgccggcgccttctcgatcattcacaacaatctcgacgcggcgatgcgcgcggccaac
atcacgggcgagaccggtacgctgaatgcccaggcgaagtccgccgcgcggtccgctttc
gagagcgccaagcagcgcttcttcggccatctgctcacatcgatgaagacgccctcgctg
atgcgctcgatcgagcgcgatctcgaggcgggccatgccgccgtcatccagctcgtctcg
accggcgaggcgctgatggagcgccggctcgcggaaatcccgaccgaggactggggcgac
gtccaagtcgatatcacgccgcgcgagtacgtgctcgactatctcgcccactctttcccg
gtgcagctctacgagccgttcaccgacagcgaaggcaatctctcgtcccggcccgtctat
cgcgacggccagccggtcgagagtcgcgatgctgtcgcacgccgcgaccggttgatcgaa
aagctcgcctcgctcccgcccgtgccgggcgcactggaccagatcgtccagcgcttcggc
accgatacggtcgccgaagtcaccggccgctcgcggcgcgtcatccgcaagggtgatcgg
ctgcaggtcgaaaaccgcgccgcctcggcgaacctcgccgagaccgccgccttcatggat
gacgccaagcgcatcctcgtcttcagcgacgccggcggcaccgggcgcagctatcacgcc
gagctgtcggcgcggaatcgcaggttgcgcatccactacctgctcgaacccggatggaag
gcggatgccgccatccagggcttaggccgcacgaaccgcaccaaccaggcgcagccgccg
ctgttccggccaatcgcgacggacgtgaaggcggagaagcgctttctcagcacgatcgcg
cgccgtctcgacacgctgggtgcgatcacgcgcggccaacgccaaaccggcggccagggc
ttgttcaggcccgaggacaatctcgaaagccattacggtcgcgacgcgttgcgccagctc
tacatgctgctggcgcgcggcaaggtcgaaggctgctcgcttcagaccttcgaggactcg
accggcctcaaactcacggacgcgaacggcatcaaggacgagctgccgccgatcaccacc
tttttgaacagattgctggcgttgaccatcgacctgcagaacgtgctgttcaccgcgttc
gagcagttgctcaccgcgcgcatcgagggcgcgatcgcgtccggtacatacgacgtcggt
ttggagacgctgcgggccgaaagcttcgtcgtcaccgatcgacgcacgatctacacccat
cccggcaccggcgcggagactcggctactcaccatcaccgagcgccagcgcaaccatcct
gtcacgctggacgaggggctcgataggctctccgatccgcgcgccctgctcctcatcaac
gagcgttccggccgtgccgccgttcaggtcccggcgccgagcctcatgctcgacgacggc
gagatcgagcggcgcgtgcggctgatccgaccgatggagaatcacagcctgccgctaaag
gcgatggcggaaagccactggacagaggccgaccgcgggcgcttcgccgcggcatgggcc
gctgaactcggcgaagtgcccgagttcaccgacagcaccgtccatgttgtagcggggttg
ctcctgccgatctggaagcggctgccgaacgagtcgacacgcgtctaccggcttcagacc
gatgccggcgagcggatcatcggccgcaaggtttcgcctgcctgggtagcgaccgcgctc
gccgcggacgcattgacgctgacccccgagaatgcctttgccgccctcctggaggggcgg
accgtcttcgacctcgccgaaggtctgcagctccgccgagtccgcgtcatgggcgccgag
cgcatcgagctgtcgggtttcaacgacacgatgcgcgaccggctcaaagtctacggcctc
ttccacgagatcatctcgtggaagctgcgcatgttcgtgccgaccgacgctacgggcgcc
gcggtcttggcgcgggtgctcgaccgctatcccgtcgagcgcatcgccgaacgggaggcc
gcgtga
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