Hyphomicrobium denitrificans 1NES1: HYPDE_27873
Help
Entry
HYPDE_27873 CDS
T02646
Name
(GenBank) periplasmic serine protease (DegP)
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt01503
Cationic antimicrobial peptide (CAMP) resistance
hdt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HYPDE_27873
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
HYPDE_27873
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hdt01002
]
HYPDE_27873
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hdt03110
]
HYPDE_27873
Enzymes [BR:
hdt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
HYPDE_27873
Peptidases and inhibitors [BR:
hdt01002
]
Serine peptidases
Family S1: chymotrypsin family
HYPDE_27873
Chaperones and folding catalysts [BR:
hdt03110
]
Other chaperones and cochaperones
DegP / HtrA
HYPDE_27873
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
Trypsin
PDZ_6
PDZ
PDZ_Tricorn
Peptidase_S46
TP0546_4th
Motif
Other DBs
NCBI-ProteinID:
AGK57254
UniProt:
N0B194
LinkDB
All DBs
Position
1049308..1050894
Genome browser
AA seq
528 aa
AA seq
DB search
MDLQNPGHNEIEVCGDGSPRKRKRRFIGAAGVTAAGGAAIAFLVAAAAVPVASPLSHVLA
LSGSAAAAEAASPPAAVMPSFANLVEKVKPAVVSIYVRSEETSPLTSWEQQGDNDEQGQQ
GQRGGPFQFFFGSPDGPQFGLPNIQPGPHVVRAQGSGFFITGDGYLVTNNHVVKNAKKVE
VRTTGGKTYTAKIIGTDPKTDLALLKVDASEDFPHVAFASTLPKVGDWVVAMGNPFGLGG
TVTAGIVSAQGRDIGSGPYDDYIQIDAPVNSGNSGGPTFNLNGEVIGINTAIYSPSGGSV
GIAFDIPSTTAKSVVDQIKSTGKVTRGWIGVTIQPVTDDIAASMGLKSASGAIVDEPQSG
GPAAEAGLKSGDVITHMDGMEVKDSRDLARKVGAVAPGQTIKLTVVHNGKERTVELTARS
YPSDTLASNDDVNGQRPEFGMMLAPSSDVAGARADGVVVTGVNPGGVASEKGVQQGDVIT
AVGGKSVSAPRDVQTAIREAQNEGKSAILLHLKTADGGRFVALPLKQG
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatttacagaacccaggacataacgaaatcgaggtatgcggcgatggctccccgcgg
aagcgcaagcggcgtttcatcggggcggccggcgtgaccgctgccggaggtgctgcaatc
gcttttcttgtggcggcagcagcagttcccgtcgcgagcccgctatcgcatgtccttgca
ttgagcggttcggctgctgctgcggaggctgcgagcccgcccgcggctgtaatgccgagc
tttgcgaacctcgtcgagaaggtaaagcctgcagtcgtttccatctacgtccgttccgaa
gagacatcgccgcttacctcgtgggaacagcagggagacaatgacgaacaggggcagcaa
ggccaacgaggcggtccgttccagtttttcttcggctctcctgatggtccgcaattcggc
ctgccgaacatacagcccgggccgcatgtcgtgcgcgctcaaggatccggctttttcatt
acgggtgacggctacctcgtgaccaacaaccacgtggtgaagaatgccaagaaggtcgag
gtcaggacgactggcggcaagacatatacggccaagatcatcggaacggatccgaaaacg
gatcttgcccttctcaaggtcgatgcgtcggaggactttccgcatgtcgcatttgcctcg
acgctcccgaaggtcggagattgggtcgttgcgatgggcaatccgttcggtctcggcggt
accgttactgccggtatcgtttccgcccaaggccgcgatatcggcagcgggccctacgac
gactacattcagatcgacgcgccggtgaactccggcaactcgggcggaccgaccttcaat
ctcaacggcgaagtcatcggcatcaataccgccatctattcgccatccggtggctcggtc
ggcatcgcattcgatatcccgtcgactacggcgaagtcggtcgtcgatcagatcaaatcg
accggtaaggtcacgcgcggctggatcggcgttacaatccaacccgtcaccgatgatatt
gctgcgagcatgggcctgaagagcgcgtccggtgcgatcgtcgacgagccgcaatccggc
ggaccggcggctgaagccggtctgaagagcggcgacgtgatcacgcacatggatggcatg
gaggtcaaggattcacgcgatctcgcgcgcaaggtcggtgctgtggcaccggggcagacg
atcaagctgacggtcgtccataacggcaaggaacgcaccgtcgaactcacggcacgctct
tatccgtcggacacactcgcctccaacgatgacgtaaatggccaaagaccggaattcggc
atgatgctcgcgccttcgagcgatgttgccggtgcacgtgccgatggcgttgtcgtcacc
ggcgtcaatccgggcggtgtcgcgtcggagaagggcgtgcagcagggcgacgttattacg
gccgttggcggcaagtctgtctctgcgccgcgtgacgttcagaccgcaatccgcgaggcg
cagaacgaaggcaaatccgctattcttctgcacctcaagacggcggacggcggtcgcttc
gtggcgctgccgctgaagcagggatga
DBGET
integrated database retrieval system
