KEGG   Hyphomicrobium denitrificans 1NES1: HYPDE_28363
Entry
HYPDE_28363       CDS       T02646                                 
Name
(GenBank) two component sigma-54 specific Fis family transcriptional regulator
  KO
K19641  two-component system, NtrC family, response regulator HupR/HoxA
Organism
hdt  Hyphomicrobium denitrificans 1NES1
Pathway
hdt02020  Two-component system
Brite
KEGG Orthology (KO) [BR:hdt00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HYPDE_28363
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:hdt02022]
    HYPDE_28363
Two-component system [BR:hdt02022]
 NtrC family
  HupT-HupR (hydrogenase synthesis regulation)
   HYPDE_28363
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg AAA_lid_14 HTH_8 AAA_5 AAA_2 AAA HTH_50 HTH_30 AAA_3
Other DBs
NCBI-ProteinID: AGK57352
UniProt: N0B563
LinkDB
Position
1134489..1135976
AA seq 495 aa
MTALPTVLVVDDEQRSLESLQRILEDCFDVKTAVSAEEAEEILENEWVQVILCDQRMPNV
SGVEFLKSVRGRWPDVVRMIISGYTDAEDIIRSINDAGIYQYVTKPWRPESLILTLKNAA
RLFELQRQNELLAIELKMSSERAENVIATRRVELKQHYRRDDGIIRSPDSPMNEVCARIA
RVAPYDISVLVTGESGTGKELVSRALHYNSLRWDKPFVVENCAAMPSELLESELFGHKRG
AFTGAVEDHVGLFERADGGTVFLDEIGEVSPAFQVKLLRVLQEGEIRPVGRRQTRKVDIR
VIAATNKDLEAEVRAGRFREDLYYRLSAVTIHVPALRDRRVDIPIISQTLLDKAQKQLGK
RVKRLSAEAIACLTAYHWPGNVRELQNEIQQVLVMGVENEEIGADLLSSRILRAAPADEG
GEIDLIGSLDGTLRERVESVEACIIRETLIRHRWNKSRAAKELGLSRVGLRSKLERYGLE
KVEGLDAERRRKIAS
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgaccgcgctgccgaccgtgctcgtcgtcgatgatgagcaaagaagcctcgagtcgctc
cagcgcattctggaggattgcttcgacgtcaagacagccgttagtgcggaggaggcggag
gaaatcctcgagaacgaatgggtgcaggtgatcctctgcgatcagcggatgccgaatgtc
tcgggggtcgaatttctgaaatcggtgcgtggccgctggccggatgtcgtgcgcatgatc
atctcgggctacaccgacgcagaagatatcatccgctccatcaacgacgccggtatctat
caatatgtcaccaagccctggcggccggaaagcctgatcctcacgctcaagaacgcggcg
cgcctcttcgagctgcagcggcagaacgagcttctggccatcgagctcaagatgagttcg
gagcgagctgaaaacgtcatcgcgacgcgtcgcgtcgagctcaagcagcattaccgtcgc
gatgacggcattatccgcagccccgacagccccatgaacgaggtatgtgcccgcattgca
cgcgtggcgccttacgacatctctgtgttggtcaccggcgagtcggggaccggaaaggag
ctggtctcacgcgcccttcactacaacagcttgcggtgggacaaaccattcgtggttgag
aactgcgcggcgatgccgagcgagcttctggaaagcgagctgttcggtcacaagcgcggt
gccttcaccggcgccgttgaggaccacgtcgggctgttcgaacgcgccgacgggggcacg
gtgtttctagatgagatcggtgaggtgtcgccggccttccaggtgaagctgctgcgcgta
ctgcaggaaggcgaaatccgtcccgtcggacggcggcagactcgcaaagtggacattcgc
gttatcgccgcaaccaacaaggaccttgaagccgaggtgcgggcgggacgtttccgcgag
gacctttactaccgcctatccgccgtaacgatccacgttcccgctcttcgcgaccggcgc
gtcgacattcccattatctcgcagacgcttctcgacaaggcgcagaagcagttgggcaag
cgggtaaagagactctcggccgaggcaatcgcctgccttacagcctatcactggcccggt
aacgtgcgtgaactacagaacgagattcagcaggttctcgtcatgggcgttgagaatgag
gagatcggcgccgacctcttatcttcgcgcatcttgagagcggcacctgcggacgagggc
ggagagatagacctcatcggatctctggacggaacgctgcgggaaagggtcgaatcggtc
gaagcctgcatcatccgcgaaaccctgattcggcatcgctggaacaagagccgcgctgcc
aaggagctaggactttcgcgcgtcggtttgaggagtaagctcgagcgctatggtctcgag
aaagttgaaggactggatgcggaaaggcgccggaagatcgcaagctaa

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