Hyphomicrobium denitrificans 1NES1: HYPDE_28413
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Entry
HYPDE_28413 CDS
T02646
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hdt03021
]
HYPDE_28413
Transcription machinery [BR:
hdt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HYPDE_28413
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
DUF3431
Motif
Other DBs
NCBI-ProteinID:
AGK57362
UniProt:
N0B572
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All DBs
Position
1147750..1148637
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AA seq
295 aa
AA seq
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MATKGLPTLAGGSLGLSRYLEEIRKFPMLAPDEEYMLAKRWQQHQDSDAAEKLVTSHLRL
VARIAMGYRGYGLPIGEVISEGNVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSLVKMGTTAAQKKLFFNLRRAKSQLQALDDGDLRPDQVKAIATKLGVPEEDVVSMNRRL
GGDASLNAPIRAESESGEWQDWLVDDTPTQEDRLVEDEELQRRKSYLSSAMSVLNDRERR
VFEQRRLAEEPATLEELSAEFGVSRERIRQIEVRAFEKVQKAVTSNARRAEAPAA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaaggtcttccgacactggcaggcggttcgctcggcctctcgcggtatctt
gaggaaatccgcaagtttccgatgcttgcacccgacgaagagtacatgctggccaagcgc
tggcagcagcatcaggattccgacgccgccgagaaactggtgacgtcgcatctgcgtctc
gtcgcccgcattgcgatggggtaccgcggctatggcctccccatcggcgaagtcatctcc
gaaggcaatgtcggcctcatgcaggcggtgaagcgcttcgaccccgagaagggctttcgt
ctcgccacctatgcgatgtggtggatacgtgcgtccattcaagagtacattttgcgctcg
tggagcctcgtgaagatgggcaccactgcggcgcagaagaagctcttcttcaatctgcgg
cgcgccaagagccagttgcaggcgcttgacgacggcgatctgcggccggatcaggtcaag
gcgatcgcgacgaagctcggcgttcctgaagaggatgtcgtgagcatgaaccgccgtctc
ggtggtgatgcttcgctcaacgcaccgatccgtgccgagtccgaatccggcgaatggcag
gattggctcgtcgacgatacgccgacgcaagaagaccggctcgtcgaggatgaggaactg
cagcggcgcaagtcgtatctctcttcggccatgtcggtcctgaatgaccgcgaacggcgc
gtcttcgagcaacggcgtctggccgaggagccggcgacgctcgaggagctgtcggcggag
ttcggagtcagtcgcgaacgcattcgacagatcgaggttcgcgccttcgagaaggttcag
aaggccgtaacttcgaacgcacggcgggctgaagctccggccgcctga
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