Hyphomicrobium denitrificans 1NES1: HYPDE_28458
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Entry
HYPDE_28458 CDS
T02646
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYPDE_28458 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hdt03400
]
HYPDE_28458 (uvrC)
DNA repair and recombination proteins [BR:
hdt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYPDE_28458 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
HHH_2
GIY-YIG
UVR
HHH
DprA_N
TAFII55_N
Motif
Other DBs
NCBI-ProteinID:
AGK57371
UniProt:
N0B9Z8
LinkDB
All DBs
Position
complement(1155995..1157989)
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AA seq
664 aa
AA seq
DB search
MTEDQISAGSAAAPETPRKTGADVIAGYLKTLPQTPGVYRMLDAAGEVIYVGKARQLKSR
VSNYTRLNGHTNRIARMILATASMEFVTVATEAEALLLEANLIKRFRPRFNVLMRDDKSF
PYILIARDHPAPAVMKHRGARNRKGEYFGPFASAGAVDRTVNMLQRAFLLRSCSDSVYES
RTRPCLLYQIKRCSAPCTGEIKLEDYAELVDEAERFLKGESQSVRAMYQRLMQEAADALE
FETAAKYRNRLWALAHVTADQSINPEGVEEADVFAAYQDGGQTCIQVFFFRTGQNWGNRA
YYPKADRSLDAPDILDSFIAQFYDDKPVPRLILISHDIPNRALLAEALTTKAQRKVEIRV
PSRGTKSSLVEHALTNAREALGRKLAESSTQARLLEGIAERFNLPASPRRIEVFDNSHIA
GTNAVGAMIVAGPEGFVKGQYRKFNIKSPDVAPGDDYAMMREVLTRRFKRIADAEVLEEI
ETEVAELVADAAGEISATPAPEDDATEEQTFPDRPDLVLIDGGLGQLSVAREVLAGFGLH
DIQLIGVAKGPDRDAGREHFHIPGRDHPILLETRDPVLYFVQRLRDEAHRFAIGTHRAKR
AKALGVNPLDEIEGVGPTRKRALLKHFGSAKAVSRAGIEDLKAVDGISADMARKIYDFFH
ERSL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaccaaatatcggcgggctcggcagccgcccccgaaactccgcgcaagacc
ggcgccgatgtcatagccggatacctgaaaacgctgccgcagacgcccggcgtctatcgc
atgctggatgcggccggcgaggtcatctacgtcggcaaggcacggcagctgaaatcccgg
gtttcgaactacacgcggctcaacgggcataccaaccgcatcgcgcgcatgatcctcgcg
acggcctcgatggaattcgtgaccgttgccaccgaggctgaggcacttctgctcgaagcc
aacctgatcaagcgcttccggccgcgcttcaatgtgttgatgcgcgacgacaagtcgttc
ccgtatattctcatcgcacgcgaccatccggctcccgccgtgatgaagcatcgcggcgcc
cgtaaccggaagggggaatacttcgggccgttcgcttctgcaggcgccgtcgatcgcacc
gtgaacatgctgcagcgcgcgttcctgctgcgctcctgttccgacagcgtctatgaaagc
cgcacgcgtccatgcctgctctatcagatcaagcgctgctcggcgccgtgcacaggcgaa
atcaagctcgaggactatgccgagctcgtcgacgaagccgaacgcttcctcaaaggcgag
agccagagcgtgcgtgcgatgtatcagcgcttgatgcaggaagcggccgatgcactcgaa
ttcgaaacggccgcaaaataccggaaccggctttgggcgcttgcgcacgtcacggcagat
caatcgatcaacccggaaggcgtcgaggaagccgacgtattcgccgcctatcaggacggc
gggcaaacgtgcatccaggtcttctttttccgtaccgggcaaaactggggcaatcgcgcc
tattatccgaaggccgatcgttcgctcgatgcgccggacatcctcgatagcttcatcgcc
cagttctacgacgacaagccggtgccgcgcctgatcctcatttcgcacgatattccgaac
cgcgcgcttctcgccgaagccttgacgaccaaagcccagcgcaaagttgaaattcgtgtc
ccctcccgcggcacgaaatcgagtctcgtcgaacatgcattgacgaatgcgcgcgaagcg
ttggggcgcaaactcgccgaaagctcgacgcaggcgcgccttctcgaaggtatcgccgaa
cgcttcaacctaccggcctctccccgccgtatcgaagtattcgacaacagccatatcgca
ggcacgaatgccgtcggcgccatgatcgtcgcggggcccgaagggttcgtcaaaggccag
tatcgcaagttcaacatcaagtcgcccgacgtggcgccgggcgacgattatgcgatgatg
cgggaagtgctgacgcgtcgtttcaagcgcattgccgacgccgaggtcctcgaagaaatc
gaaaccgaggtcgccgagcttgtcgcagatgcggcaggcgaaatctccgcgacacccgca
cctgaggacgatgctaccgaagagcagacgtttcccgaccgccccgaccttgttttgatc
gacggcggcctgggacagctttccgttgcgcgcgaggttttggccggtttcggactgcac
gacattcaattgatcggcgtcgccaagggtcccgatcgcgacgcagggcgcgagcatttc
cacattccggggcgcgatcatccgatcttgctcgaaacacgggatccggtgctctatttc
gttcagcgtctgcgcgatgaagcgcaccggttcgcgatcggaacgcaccgcgccaaacgc
gcaaaggccctcggcgtcaatccgctcgacgagattgaaggcgtcgggccaacgcgcaaa
cgtgcgctgctgaagcatttcggctcggccaaagccgtttcccgcgccggtatcgaggat
ttgaaagcggtcgacggaatttctgccgatatggcccggaaaatctacgactttttccac
gaacgttccctctag
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