Hyphomicrobium denitrificans 1NES1: HYPDE_28758
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Entry
HYPDE_28758 CDS
T02646
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hdt03032
]
HYPDE_28758
03036 Chromosome and associated proteins [BR:
hdt03036
]
HYPDE_28758
03400 DNA repair and recombination proteins [BR:
hdt03400
]
HYPDE_28758
DNA replication proteins [BR:
hdt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HYPDE_28758
Chromosome and associated proteins [BR:
hdt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HYPDE_28758
DNA repair and recombination proteins [BR:
hdt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HYPDE_28758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AGK57431
UniProt:
N0BA69
LinkDB
All DBs
Position
1215285..1215557
Genome browser
AA seq
90 aa
AA seq
DB search
MSKKDLIDAVARDCELTKEKASGVVDAVLAHIREAMKEGHEVRIPDFGTFKVAARKAREG
RNPATGMTIQIPASRVPKFTPAKGLKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaaagatttaatcgatgccgtcgcgagagactgcgagctgaccaaagaaaaa
gccagcggcgtcgtcgatgctgtactcgcgcatattcgcgaggccatgaaggaaggccat
gaagtgcgtattccagatttcggcacgttcaaagtcgctgcccgcaaggcgcgcgagggt
cgtaacccggcgaccggcatgacgatccagatccctgcgtcgcgcgtgccaaagttcacg
cccgcgaagggtttgaaagacgctttgaactaa
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