Hyphomicrobium denitrificans 1NES1: HYPDE_28933
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Entry
HYPDE_28933 CDS
T02646
Name
(GenBank) prolyl-tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HYPDE_28933
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hdt01007
]
HYPDE_28933
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hdt03016
]
HYPDE_28933
Enzymes [BR:
hdt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
HYPDE_28933
Amino acid related enzymes [BR:
hdt01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HYPDE_28933
Transfer RNA biogenesis [BR:
hdt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HYPDE_28933
Prokaryotic type
HYPDE_28933
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
ProRS-C_1
Motif
Other DBs
NCBI-ProteinID:
AGK57465
UniProt:
N0BBH7
LinkDB
All DBs
Position
1251076..1252734
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AA seq
552 aa
AA seq
DB search
MVRRGSPRDVNERASDGAFQVLRVRSPSDARRFFNVHVRDQEMSKRALSVTREENFPDWY
QAVVRDGDMAETSPVRGCMIIKPWGWGVWERLQVELDARIKDTGHDNCYFPLFIPMSFIA
KEAEHVEGFAKEMAVVTHHRLKNEGGKLVVDPDAKLEEPLIVRPTSETIIGDAFQRWIKS
YRDLPLLMNQWANVVRWEMRTRLFLRTAEFLWQEGHTAHADRDDAVAETLKMLEVYRTFA
EDVLAMPVIAGEKPANERFPGADNTYSIEAMMQDGKALQAGTSHYLGTHFAEAQNIQFQN
TDGKLTYCHTTSWGVSTRLIGGVIMTHGDDDGLRLPPMIAPRQIVIVPMLRDKPEDAALI
DYCVSLEKDLKAAGIRTLVDMKAVKSAEKRWNWVRRGAPIIVEIGGRDASGSNVTFMRRD
RLRDGDKVISQTLARADFVAQAPALLQEIQQTLYSEAKARLDGNIITTFKSFEDLADYFG
PAEGEDEGGAFKGWARVPWSRPEGASLEAIADRLKALKLTIRNAPLGQEEAVGKCLFTGE
AAKEYVLIARAY
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggtcaggcgcggctcgccgcgcgacgtcaatgagcgagcgtccgatggggcatttcag
gttcttcgtgtgcgttcgccgtccgatgcgagacgctttttcaacgtacacgtcagggac
caagagatgagcaagcgcgccctttccgttacccgcgaggagaacttccccgactggtac
caagctgtcgtccgtgacggcgacatggccgagacgagccccgttcgcggctgcatgatc
atcaagccgtggggctggggcgtgtgggagcgcctccaggtcgaactcgacgcccgcatc
aaggatacgggccatgacaactgctatttcccgcttttcattccgatgagcttcatcgcc
aaggaggcggagcacgtcgaaggcttcgccaaggaaatggcggtcgtcacgcatcaccgt
ttgaagaacgagggcggcaagctggtcgtcgatccggacgcgaagctcgaagaaccgctg
atcgttcggccgacgtccgagacgatcattggtgacgcgtttcagcgttggatcaaaagc
taccgcgacttgccgctgctcatgaaccagtgggcgaacgtcgtacgctgggagatgcgc
acacgacttttcctgcgcaccgcggagttcctctggcaggaaggccataccgcgcacgcc
gaccgggacgacgcagtcgctgaaacgctcaagatgctcgaagtctaccgcacgtttgcg
gaagatgtgctggcgatgccggtgatcgcgggcgaaaagccggcgaacgaacgcttcccc
ggggccgacaatacctactcgatcgaagcgatgatgcaggacggcaaggcgctgcaggct
ggcacgtcgcactatctcgggacgcacttcgcggaagcgcagaacatccagttccagaac
acggacggtaagttgacctactgccacacgacgagctggggcgtttcgactcgtctgatc
ggcggcgtgatcatgacacacggcgacgacgatggcctgcgtctgccgccgatgatcgcg
ccgcgccagatcgtcatcgtgccgatgctgcgcgacaagccggaagacgccgcgctcatc
gactattgcgtttcgcttgagaaggatttgaaggcggccggcattcgcacgctcgtcgac
atgaaggctgtgaaatcggccgagaagcgctggaactgggtgcgccgcggcgctccgatc
atcgtcgagatcggcggccgcgatgcgagcggtagcaatgtcaccttcatgcgccgcgac
cggctgcgcgatggcgacaaggtcatttctcagacattggcacgggcggatttcgtcgcc
caggctccggcgctgctgcaagagatccagcagacgctttattccgaagccaaggcgcgg
ctcgacggcaacatcatcacgaccttcaaatcgtttgaggatctggccgattatttcggg
cccgccgagggcgaggacgagggtggtgctttcaagggctgggcacgggttccgtggtcg
cgccccgagggtgcgagcctcgaagccatcgcggaccggctgaaggccctgaaattgacc
atccgaaatgcgccgcttggccaagaagaagcggtgggcaagtgtcttttcacgggagaa
gcggcgaaggagtatgtcttaatagcgcgggcctattaa
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