Hyphomicrobium denitrificans 1NES1: HYPDE_29123
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Entry
HYPDE_29123 CDS
T02646
Name
(GenBank) outer membrane autotransporter barrel domain-containing protein
Organism
hdt
Hyphomicrobium denitrificans 1NES1
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Paralog
GFIT
Motif
Pfam:
Autotransporter
AC_1
Pertactin
Motif
Other DBs
NCBI-ProteinID:
AGK57503
UniProt:
N0B3G7
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Position
1287452..1290994
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AA seq
1180 aa
AA seq
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MGRRHISTHNRSVFKPSSANQRDAFQARSACFAPPACFISALALGLIVGGSAAVGQPGGC
TSSVPGVDLTCTGIVTNPSPFTATSEFTVDIGTTTPTVSPATITQGSGFAGIEINAEDHG
GSVNMTMGSSIQMEAESESSRDGLRLTSGATTSKTYTINIDGSIASAAAEGDGIRLEGTN
YSVFNVTFGGGANVGGADNGVTVTGAQSLLLKNYGLLQGGSGDGVRIDDIGGNVSAQNRF
GFSSWGAARIVGSDDGVSISYVDGRASIANNFGGKIVGFGGDGVHVHDVDDSVSVDNSLF
GKIWGREDGIHISDVGDDVVVRNSFGGLIIGTRGDGVDIRDVRDDVMVVNAFGGKISGRD
NGIAIDDVRDDVTIVNGFGGSIAGRWSDGVHVRDVHDGSVSVKNSFGGDISGDDDGIHIA
NVDDGVTIDNRFGGMVSGRDDDGIDVRDVDEDVRVDNRFGGRITGDDNGVKIHDVDGSVR
IVNSFGGRIHGDGDNGVDIDNVDGNVRIDNRAGGSIEGRNDGVHVDDVDGNVRADNGSGS
IRGRRGDGVDISADGNATVNNGWRGRITGTDSAIQIDAGSAEINSAGLIRGSGSSDATIK
LSTEDGATINNYRGGRIVGRHYDPMDLIVEARGGAVTINNSGTMLGRIDLSDAGNSQWGN
VFNNTSDHSWVFVGTSNLGDGLADAFNNTGTMFTTDPDAPEINDITELAGVETFNNGSST
KSGTIDLQDGFTGDVTTLSPTSGGSLAFNGEAGHSYLKVDSFLGSSSDSSSDQLVINGDV
SGRTAIDVNNVNPGFGSYNPLGIEVVSATGEISPQNFVLKYGPIDTGLFDYDLYLNDSNE
WVLASAPNRTFVELPSLVSAAQSMWHDASGVWLDRTADLRASIQHPCVSEGLKGPGEACA
KPATSGAWIKGLGATESRAPEHSVSLFGTSNRYKTDYDQSGGGVVAGYDIVLRANDGQGV
WLAGVMGGYLRSVVDFESSATNADFEGGAVGGYITYLKGPWFLDAKLMANIGNVDYRGSQ
AEKDNASVTSIGGVLDTGYRIHRGQYFIEPGATLAYVNTDIDSLAVYGTSVNFANGDSLR
GRLGLRLGTTIQSERAKYEPFLGVNAWYEFLGDNAANVVSEGYALQATDSLAGAIGEVTS
GVNVYSLAEDGISGFVKGNFEFGKDDYLGFGGSVGMRVAW
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcagacacatttcgacccacaatcgctcagtcttcaaaccaagctctgctaat
caacgcgatgccttccaagcgcgatcggcgtgtttcgcgccgccagcctgcttcatctcg
gcattggcgctcggattgatcgtcggaggcagtgccgcagtcggccagccgggcggctgt
acatcgtcggttcctggagtcgatctgacgtgtacggggatcgtgacgaacccgtccccc
tttacggcgacatcggagtttacagtcgatatcggcacgacgactccaacggtgtcgccg
gcgacgatcacgcaggggagcggctttgcgggaatcgagatcaatgcggaagatcacggc
ggttccgtcaatatgacgatgggatcttcgatccagatggaagcggagtccgaatcaagc
cgagatggcctgcgacttacgagcggcgcgacgaccagcaaaacctacacgatcaacatc
gatggctccattgcatctgctgcagcagagggtgatggcattcgcctggaagggacgaat
tactccgttttcaatgtaaccttcggggggggcgcgaacgtcggcggcgccgacaatggc
gtgacggtgacgggcgctcaaagcctcttgctgaagaattacggccttctgcagggcggg
agtggagatggcgtgcgtatcgacgacatcggcggcaatgtctcggcacagaatcggttc
ggtttttcaagctggggcgccgcgaggattgtggggtccgatgatggtgtatccattagc
tatgtcgatggcagggcctcgatcgccaataactttggcggaaagatcgtgggctttggc
ggcgatggcgtccacgttcacgacgtcgacgactctgtctctgtcgataactcgctattc
ggcaaaatttgggggcgcgaggacggcattcacatcagtgatgtcggtgatgatgtcgtc
gtccgcaacagcttcggcgggttaattataggaacccgcggtgacggcgtagatatccgc
gacgtccgcgacgacgttatggttgtgaatgcgttcgggggcaagatatcggggcgtgac
aatggcattgccatagacgatgtgcgtgatgacgtcaccatcgtcaatggatttggcggt
agcatcgcgggccgttggtccgacggcgtgcacgtgcgcgatgtgcacgacggatcggtt
tccgtcaagaacagctttggcggcgacatttccggagacgatgacggcattcatatcgcc
aatgtcgacgacggcgtcaccattgacaatcgcttcggggggatggtctcgggacgagac
gacgacggcatcgacgtgcgcgacgtcgatgaggacgttcgggttgataaccggtttggc
ggacgcattacgggcgacgataacggcgtaaaaatccatgatgtcgatgggagcgtccga
atcgtcaacagcttcggcggtagaatccacggcgacggcgacaacggtgtcgatatcgat
aatgtcgatggcaatgttcggatcgataatcgggctggagggtcgatcgaaggacgcaac
gacggcgttcatgtcgatgacgttgatggcaacgtcagggccgataatggaagcggctcg
atccgcggtcgcaggggcgacggcgtcgatatttccgccgacggaaacgccaccgtcaat
aatggctggcgcgggcgcattacgggaaccgacagcgccatacagatcgatgccgggtcc
gccgagatcaactcggctgggctgatccgcggctccggcagcagcgacgctacgatcaag
ctgtcgaccgaggacggcgcgacgatcaacaactataggggtgggcggatcgtcggccgc
cattacgatccgatggacctgatcgtcgaagcgcgtggtggtgcggttacgatcaacaat
agcggcacgatgcttggtcgaatcgatctctccgacgcagggaattcgcagtggggtaac
gtcttcaacaacacgagcgatcacagctgggtgtttgtcggaaccagcaaccttggtgat
ggtcttgcagacgcgttcaacaatacgggcacgatgttcacgaccgatcccgatgcgccg
gagatcaacgacattacggagcttgccggtgtcgaaacgttcaacaacggaagctcgacc
aagtccgggacgatcgatctgcaggacgggtttaccggtgacgtcacgacgctcagtccg
acgagcggcggcagtctggcattcaacggcgaggcaggacacagctatctgaaagtcgac
agcttcctcggatcttcttcggattcaagctccgatcagttggtcatcaacggcgacgta
tcggggcgaacggcgatcgatgtcaataatgtcaatccagggttcggctcatacaatcct
cttggaatcgaagttgtcagcgctacgggcgagatatcgccacagaatttcgttctaaaa
tatgggccgatcgataccgggcttttcgactacgacctctatctcaatgactcgaacgaa
tgggtgctcgccagtgcgccaaaccgcactttcgtggaacttccgagtctggtgtcggct
gcgcaatcgatgtggcacgatgcgtcaggtgtttggctcgacagaacggccgaccttcgc
gcctccattcaacacccgtgcgtttcggagggcttgaaaggcccgggcgaggcatgtgcc
aagcccgcgacatcgggagcgtggatcaaaggactgggcgcaacggaatctcgtgcacct
gagcactcggtttcgctgttcggaaccagcaatagatacaagacggactacgatcagagt
ggcggtggggtcgtcgccggctacgatatcgtgctgcgcgctaatgacggacagggcgtt
tggctcgccggtgtgatgggcggctacttaagatcggtcgtcgatttcgaaagctcggca
acaaatgccgatttcgaaggcggtgcggtgggcggttacatcacctatctcaaaggccct
tggttcctcgacgccaagctgatggcaaatatcggcaacgtcgattatcgcggttcgcaa
gccgagaaggacaatgcgagcgtaacatcaatcggcggcgtgctggatacgggctatcgc
atccatcgcggccagtacttcatcgaaccgggtgcgacactggcctatgtcaacaccgac
atcgatagtcttgccgtctatggcacgtccgtcaacttcgcaaacggcgatagtctgaga
gggcgtctgggcctgcgtcttggtacgactattcaaagcgagcgggcaaaatatgaaccg
tttctcggagtcaatgcctggtacgagttcctcggcgacaacgccgctaatgttgtcagt
gaaggatacgcacttcaggcgacggacagtttggctggcgctatcggcgaagtgacgagc
ggtgtgaacgtctacagcctcgcagaggacggcatcagcggctttgtaaaaggcaatttt
gaatttggaaaagacgactacctcggatttggaggcagcgtcggcatgcgcgtcgcttgg
tga
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